Lysinibacillus agricola: FJQ98_06050
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Entry
FJQ98_06050 CDS
T07480
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lagr
Lysinibacillus agricola
Brite
KEGG Orthology (KO) [BR:
lagr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lagr03032
]
FJQ98_06050 (topA)
03400 DNA repair and recombination proteins [BR:
lagr03400
]
FJQ98_06050 (topA)
Enzymes [BR:
lagr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FJQ98_06050 (topA)
DNA replication proteins [BR:
lagr03032
]
Prokaryotic type
DNA Topoisomerases
FJQ98_06050 (topA)
DNA repair and recombination proteins [BR:
lagr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FJQ98_06050 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
DUF2996
Motif
Other DBs
NCBI-ProteinID:
QQP13617
LinkDB
All DBs
Position
1289978..1292056
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVKASIGHVRDLPRSQMGVSSENNYEPKYITIRGK
GPVLQDLKSAAKKVKKVFLAADPDREGEAIAWHLATALNIDINSDCRVVFNEITKDAIVE
SFKNPRPINMDLVDAQQTRRILDRLVGYNISPILWKKVKKGLSAGRVQSVALRMIIDREN
EIKNFQPEEYWTIEGSFEKGKKTFDALYYGDGKEKIKLTNEEQVKSILKNVKGTNFDVVN
VSKKERKRNAAPAFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDIGKKEGTVGLITYM
RTDSTRISDTAKTEAMAYIESKYGKEYISTETKQTKKASNAQDAHEAIRPTSTMRAPEEL
KAVLSRDQLRLYRLIWERFIASQMAPAVLDTVAVDLQNGDVLFRANGSQVKFAGFMKLYI
EGTDDQTEETTKLLPDMAVGDQVKSLEIEPKQHFTQPPPRYSEARLVKTMEELGIGRPST
YAPTLDTIQRRGYVVLDAKRFMPTELGEIVHQLVLEFFPDIINIEFTAQMEQDLDDIEEG
GRQWKEVVHEFYKDFEVHVKYADEAMEKVVIKDEPAGEDCELCGSPMVFKLGRYGKFMAC
SNFPDCRNTKAIMKPIGVKCPSCETGEIVERKSKTKRLFYGCNQYPECEFVSWDKPISRP
CPKCSALLVEKKIKKGVQIQCTKCDYEEAPIQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcggattatttagtgattgtagaatcaccagcaaaagcaaaaacaattgaacgatat
ttagggaaaaaatataaggtgaaagcgtcaatcgggcatgttcgtgatttaccacgtagc
caaatgggcgttagttctgaaaataattacgaacctaaatatattactattcgtggtaaa
gggcctgttttacaggatctaaagtctgcggctaaaaaagtgaagaaagtctttctagcg
gccgatccagaccgcgagggagaggcaattgcttggcaccttgcgactgcgttaaatatt
gatattaattcagattgtcgtgtcgtttttaacgaaattacaaaagatgcgattgtagaa
tcctttaaaaatccacgtcctattaacatggatttagtagatgcgcagcaaacaagacgt
atattggacagacttgttggttataacattagcccgattttatggaaaaaagttaaaaag
ggattatcagcaggacgggttcaatctgtagcactacgcatgattattgatcgtgaaaat
gaaattaaaaacttccagccagaagaatattggacaatagaaggatcttttgaaaaaggt
aaaaaaacgttcgatgcactatactatggtgatggtaaagaaaaaattaaattaacaaat
gaagaacaagtaaaatctattttaaaaaatgttaaaggtacaaactttgacgttgtgaat
gtatcaaaaaaagaacgtaaacgaaatgcagcacctgcttttactacatcttctttacag
caagaggctgcacgtaagttaaatttccgtgctaagaaaacgatgatgcttgcacaacaa
ttatatgaaggtattgatattggtaaaaaagagggtacagtcggtttaatcacttatatg
cgtaccgattcaacacgtatttcggatacagcgaaaacagaggcaatggcatacattgaa
tcgaaatacggtaaagaatacatttccacagagacgaagcagactaaaaaagcatcgaat
gcacaagacgcccatgaggccattcgtccaactagtacaatgcgagctccagaagaatta
aaagcggtgcttagtcgtgaccaattgcgcttataccgcttaatatgggagcgctttatc
gcaagtcagatggcaccagctgtacttgatacagttgctgtagaccttcaaaatggtgat
gttttattccgtgcaaacggctcgcaagttaaatttgcaggctttatgaagctatatatt
gagggtaccgatgatcaaacagaagaaacaacaaagcttctaccggatatggcagttggc
gatcaagtaaaatcccttgaaatcgaacctaagcaacattttacacagccaccaccacgt
tattcagaggcgcgtcttgtaaaaacaatggaagagttaggtatagggcgcccgtccaca
tatgcaccgaccctcgatacaattcagcgccgtggctatgtcgtattagatgcaaaacga
tttatgccgacagagctaggagaaatcgtacaccaactcgtactagagtttttccctgat
atcataaatatcgaattcacagcacaaatggagcaagatttggatgatattgaagaaggt
ggtcgtcagtggaaagaagttgtgcatgagttttataaggactttgaggttcatgtgaaa
tatgcagatgaggctatggaaaaggttgttataaaagatgaaccggctggcgaggattgt
gagctttgtggatctccgatggtctttaagcttggacgatatgggaaatttatggcttgt
tcaaacttcccagattgccgcaatacaaaagctattatgaaacctattggcgtaaaatgt
ccttcttgtgaaacaggcgaaattgtagaacgaaagagtaaaacaaagcgtttattctat
ggctgcaatcagtaccctgagtgtgaatttgtctcatgggacaagccaatcagcagaccg
tgtccgaaatgtagtgcattattagtagagaaaaaaataaaaaaaggtgtgcaaattcag
tgtacgaaatgtgactatgaagaagcacctattcaatga
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