Lysinibacillus agricola: FJQ98_13490
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Entry
FJQ98_13490 CDS
T07480
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lagr
Lysinibacillus agricola
Pathway
lagr03420
Nucleotide excision repair
lagr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FJQ98_13490
03430 Mismatch repair
FJQ98_13490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lagr03400
]
FJQ98_13490
Enzymes [BR:
lagr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJQ98_13490
DNA repair and recombination proteins [BR:
lagr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJQ98_13490
MMR (mismatch excision repair)
Other MMR factors
FJQ98_13490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QQP10317
LinkDB
All DBs
Position
2800610..2802766
Genome browser
AA seq
718 aa
AA seq
DB search
MNGAQKAFFEEKERSLGVRLNDVQTQAVLQTNGPLLLLASPGSGKTTTIIMRIGYMIEAL
GVNPSRIKAVTFSKASAGDMKSRFAKFFPHLPPVDFSTIHSLAFQVVRQTLERQGISYGI
IEESDKPGVVSKKRVLREIFEQLNGSKITEDQLDELLTYITFIKNKMLPEQEWAIAEVKV
PRKVEILQRYEEYKRTGSDRLLIDFDDMLLMANDIFTKNREVLAQYQRRYDYYLTDESQD
TSPVQHAIIAKLVAVHQNLCVVADEDQAIYSWRGAEPDYLLNFRKIYPEAHVLLMTQNYR
SSATIVEPANIFIQRNKKRYNKQMFTENPAAEPISFKILENYNLQAKYLVDQLKNLSKRG
STAILYRNNTSAIPLMDAFDRAGLPFYMKDSTIRFFTHWVVEDIKNFMRLAYNTKNITVF
EKVYRKMNAYITPTQLKALQKVPDDGCVFTQLLEHVELKDYQPEYIKRIRKTYDSIQFDK
TTPTAMLEHIRYDFGYERTLKKMSEKLGFNYENLLDIVNVLGLIARHTPTMTEFAGRLKQ
LENLARSSHIKNELNAITLTTLHSSKGLEFDRVYLIDLIEGILPSEAEEEIEEETRLFYV
GITRAISHLELISYSKRFKTSVVPSIFMKALKQIVSPQELPKKTPESPRKALKQYSNERT
ITTESALIVGSKVKHVIFGEGEILAVTSSTIEMSFATRIKKFLTDTCLQQGYLETMED
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagcgcaaaaagcgttttttgaggaaaaggagcgttcacttggcgttcgtcta
aatgatgtgcagacgcaggcggtgttgcaaacgaatggtccgctattactattggcatct
cccggttcaggaaaaacgacgacgattattatgcgtatcggctatatgattgaggcgctt
ggtgttaatccttctcgcataaaggctgtcacgtttagtaaggcatcagccggtgatatg
aagtcacgttttgcaaagtttttcccgcatttgccaccggttgatttttcgacgattcat
agtttagcatttcaagttgtgcggcagacacttgaacgtcagggcatttcgtacggcatc
attgaagaatcggacaagcctggtgttgtttcaaaaaaacgagtgcttcgcgagattttt
gaacaattaaatggttcaaaaattaccgaagatcagttagacgagctactgacgtacata
acgtttatcaaaaataaaatgctaccagaacaggaatgggcaattgcagaagtaaaggtg
ccaagaaaagtcgagattttacagcgttatgaggaatataaacgcacaggtagtgaccgt
ttgttaattgattttgacgatatgctattaatggcgaatgatattttcacgaaaaatcga
gaggtgttggcgcaataccaacgccgctacgattattatttaacagatgaaagtcaggat
acatcgcccgttcaacatgcgatcatcgcgaagctcgtcgcagtccatcaaaatttatgc
gtcgttgcagatgaggatcaggccatttatagctggcgcggtgcagagccagattatttg
ttgaatttccgaaagatatatccggaggcgcatgttttacttatgacgcaaaactatcgt
tcatctgcaacgattgtagagccagccaatatattcattcagcgaaataaaaaacgttat
aacaaacaaatgtttacggaaaatcctgcagcagagccaatctcgtttaaaatcctagag
aattacaatttacaggccaaatatttagtggaccagttgaaaaatctgtctaagcgcggc
tcaacggctattttatatcgaaataacacgtcagccattccgcttatggacgcgtttgac
agagcaggtttgcctttctatatgaaagattccacgattcgctttttcacgcattgggtc
gtggaggatattaagaacttcatgcgtttagcgtacaatacaaaaaatatcacggtattt
gaaaaagtttacagaaaaatgaatgcttatattacaccaacgcaattgaaggcgctacag
aaagtgccggatgatggctgtgtattcacacagttgttagagcacgttgagttaaaggat
tatcagcctgaatatattaagcggattcgcaaaacgtatgatagcattcaatttgataaa
acgacgccaacagctatgctagagcatatccgttatgactttggttatgagcgtacctta
aagaaaatgagtgagaaactcggttttaattatgaaaatttattagatattgtgaatgta
cttggtttaattgctcgtcatacgccgacgatgaccgaatttgcgggtcgtttgaagcag
cttgaaaatttagcacgttcgtctcatataaaaaatgaattgaatgcaattacactgaca
acattgcacagttcaaaaggcttggaatttgaccgtgtgtatttgattgacttgattgag
ggaattttacctagtgaggcagaagaagaaatcgaggaagaaacgcgactcttttatgtc
ggtatcacgcgtgcgattagccatttggaattaatttcgtatagtaagcgctttaaaaca
agtgtggtgccatcgattttcatgaaggcgttaaaacaaattgtttcaccgcaggaattg
ccaaagaaaacgccggaaagtccgaggaaagcactgaagcaatacagtaatgagcggacg
attacaaccgagtcagcgttaatcgttggctcaaaagtaaagcatgtgatttttggagaa
ggggagatattagccgttacgagtagcacgattgaaatgtcatttgctacgaggattaag
aaatttttgacggatacatgtttacagcaaggctatttagaaacgatggaagattaa
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