Lysinibacillus agricola: FJQ98_19960
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Entry
FJQ98_19960 CDS
T07480
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lagr
Lysinibacillus agricola
Pathway
lagr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FJQ98_19960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lagr03400
]
FJQ98_19960
Enzymes [BR:
lagr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FJQ98_19960
DNA repair and recombination proteins [BR:
lagr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FJQ98_19960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
DEAD
UvrD-helicase
AAA_16
AAA_12
AAA
nSTAND3
TsaE
NTPase_1
AAA_28
SLFN-g3_helicase
RsgA_GTPase
NPHP3_N
AAA_25
AAA_17
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QQP11457
UniProt:
A0ABX7ANE6
LinkDB
All DBs
Position
complement(4002173..4004605)
Genome browser
AA seq
810 aa
AA seq
DB search
MADNLDLFELNKFFILGRPIVSIFHNAQNMYSIVRVKIQETNLQYEDKEIIVVGYFPPLQ
MDEQYRFTGLLKQHPKYGVQFQIETFTKEVPATEQGIIHYLSSDLFVGIGKKTAETIVEK
LGANALRLILEDPNVLDVVPRLSAEKKEVIHRTIEQNLGLERVMIQLNEWGFGPQLGMKI
YQTYRTEAIELLTENPYRLIEDVEGVGFFRADELGSKLGITGNHPDRIKAAILHTLNIAA
LSDGHVYLDAEHVLPLVKDMLEQSQREEIPFETISKACIELREENKICGEETRLYLPSLY
FSEVGIASKIVALIERNNKAEHFSKDEIRKTIGETEEMLNVAYAETQANAIEQALNSAVM
ILTGGPGTGKTTVVRGVVEVYAKLHGLSLNPKEYAQKEEPFPIILCAPTGRAAKRLSEST
ELPAMTIHRLLGFTGQEKEEETEREVTGKLIIVDEMSMVDTWLAHQLLKSLHEDVQVVFV
GDQDQLPPVGPGQVLKDLLASGQIPTVELTDVYRQAEGSTIIELAHQIKRGNITNDLTLK
TTDRSFIKASSDQVANVVTQVVKSAVAKGQEIRNIQVLAPMYKGPAGIDNLNKMIQDLIN
PNDTGTRKELVFGDVTYRIKDKVLQLVNQPESNVFNGDMGEVISIIKAKETIEKQDLLVV
SFDGIEVTYQRSELNQLTLAYCCSIHKSQGSEFQTVIMPVVRGYSKMLRRNLLYTGITRA
KNFLILCGEPDVLADGLQRTDDLQRFTSLRARLNPMNVVEEVAEVETVPMNEDLQKEKTS
IDFKLTVETEPYIHPLIGMDGVSPYDYLDD
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcagataatcttgatttatttgaactaaataaattttttatactcgggcgtccaatc
gtctctatcttccataatgcacaaaatatgtattcgatagttcgtgtgaaaattcaagag
accaacttacagtatgaggataaagaaataatagttgttggatactttccgccgttacag
atggatgagcaatatcgttttacaggtttattgaaacaacatccaaaatatggtgtgcaa
tttcaaattgagacgtttacaaaagaagtgccagctacagagcaaggaattatacactac
ttatcgagcgatttatttgttggaatcgggaaaaaaacggctgaaacaattgtagagaag
ctaggggcaaatgctttgcgtcttattttagaggacccaaatgtgcttgatgttgtacca
cgcttatctgctgaaaaaaaagaagttatccatcgtacgattgaacaaaatctaggctta
gaacgagtgatgattcaacttaatgaatggggttttggaccacagctcggcatgaaaatt
tatcaaacatatcggacagaggcaattgaattattaactgaaaatccataccgccttatt
gaagatgttgagggtgtaggtttctttcgtgcggatgagttaggttcaaaattagggatt
actggtaatcatccagaccgtattaaggcggcgattttacatactctgaatatagcagct
ttatcggacgggcatgtatatttagatgcagaacatgttttaccgctagtaaaagatatg
cttgagcaaagccaacgagaggaaattccttttgagaccatttctaaagcttgcatcgaa
ttgcgtgaggaaaataaaatttgtggggaagaaacgagattatatttaccatctctatat
ttctcagaagtcggaattgcatcaaaaatagtagctttaatcgaacgtaacaataaggct
gagcattttagcaaggacgaaatacgcaaaacgattggtgaaactgaagaaatgcttaat
gtcgcatatgccgaaacacaagcgaatgctattgaacaggccttaaactcagccgttatg
attttaactggtggacctggtactggtaaaacaactgttgttcggggtgtagtagaagtg
tatgcaaagctacacggactatcattaaacccgaaggaatacgcacaaaaagaagagccc
tttccgattattttatgtgctccaacaggacgtgctgccaagcgtttatcggaatcaaca
gaacttccagcaatgacaattcatcgactgctaggctttactggccaggagaaagaggaa
gaaactgagcgtgaggttacagggaaactcattattgtagacgaaatgtcgatggttgat
acttggctcgcgcatcaattattaaaatccttgcatgaggatgttcaagttgtatttgtt
ggcgatcaagatcagcttccaccggtaggaccaggacaggtgttaaaggatttgttggct
tccgggcaaatacctactgttgaattaacagatgtatatcggcaagcagagggctcaacg
attattgaacttgctcatcaaattaaacgtggtaatatcacaaatgacctaacgttaaaa
acgacggaccgttcatttattaaagcctcttcagatcaggtagcaaacgttgtcacacaa
gttgtgaaaagtgcggttgccaaaggtcaagaaattcgtaatatccaagtgttagcacca
atgtacaaaggtcccgcaggaatagacaatttaaataaaatgattcaggatcttattaat
ccaaacgatactggtactagaaaagagctcgtctttggtgatgtcacatatcgcataaag
gataaagttttacagcttgttaatcaaccagagagcaatgtttttaatggtgatatgggt
gaggtaatcagtattattaaggcaaaggaaacaattgagaaacaagatttgcttgttgtg
tcattcgacggtattgaagtaacttatcagcgtagtgaactcaatcaattgacacttgcc
tactgttgttcaattcataaatcgcaaggctctgagttccaaacagttataatgccggtt
gtacgtggctattctaaaatgttacgtcgtaatttgttatatacaggtattacgcgtgca
aaaaatttcttgattttatgtggtgagccggatgtgttagcagatggcttacagcgtacg
gatgatttacagcgctttacgtctttacgtgcaaggctcaatccaatgaatgtggtagag
gaagttgcagaagtagaaacggttccaatgaacgaggatttacagaaagaaaaaacatca
attgatttcaagttaacggtagaaacggagccatatatccatccattgattggaatggat
ggtgtctcaccgtatgattatttagatgattaa
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