Lysinibacillus agricola: FJQ98_20235
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Entry
FJQ98_20235 CDS
T07480
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lagr
Lysinibacillus agricola
Pathway
lagr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FJQ98_20235 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lagr03400
]
FJQ98_20235 (ruvB)
Enzymes [BR:
lagr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJQ98_20235 (ruvB)
DNA repair and recombination proteins [BR:
lagr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FJQ98_20235 (ruvB)
RecFOR pathway proteins
FJQ98_20235 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
DUF815
AAA_14
NB-ARC
nSTAND3
AAA_22
Sigma54_activat
AAA_3
Rad17
TsaE
RNA_helicase
Sigma54_activ_2
NTPase_1
AAA_17
AAA_24
NPHP3_N
AAA_25
NACHT
Bac_DnaA
AAA_18
IstB_IS21
ABC_tran
AAA_28
Parvo_NS1
AAA_33
AAA_7
ATPase_2
AAA_11
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
QQP11507
LinkDB
All DBs
Position
complement(4063316..4064320)
Genome browser
AA seq
334 aa
AA seq
DB search
MSERMMASEAGNYDEQFELSLRPQRLAQYIGQHKVKENLQIFIEAAKLRQESLDHVLLYG
PPGLGKTTLAAVIANEMNVNVRMTSGPAIERPGDLAAILSSLEPGDVLFIDEIHRLPRAI
EEVLYPAMEDFCLDIVVGKGPEARSVRLDLPPFTLVGATTRAGALSAPLRDRFGVLLRLE
YYDHTSLAEIVVRSAHLFDVDIEQVAALEMATRSRGTPRIANRLLKRVRDYAQVLGDGMI
TEGLAKQGLELLQVDPRGLDHIDHKLVTNMIERFRGGPVGLDTLAASIGEERVTIEDVYE
PYLMQIGFIQRTPRGRVATHLAYEHFGYEYPQQT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacgtatgatggctagtgaggcaggtaactatgatgaacagtttgaattatct
ttacgaccacaaaggttagcacaatacattggtcaacataaggtaaaggaaaatttacaa
attttcattgaagcggcaaagcttcgtcaggaaagtttagatcatgtgctgttatatgga
ccgcctggacttggtaaaactaccttagctgctgtcattgctaatgaaatgaatgtcaat
gtgcgcatgactagcggccctgcgatcgaacgtcctggagatttagcagctattttaagc
tcactggagccaggggatgtgctatttatcgatgaaatacatcgcctacctcgtgcaata
gaagaggttctttatcctgctatggaggatttttgtttagatattgtcgttggtaaaggc
ccagaagcgcgttctgtacgacttgatttaccgccatttacactcgttggtgcaacaaca
agggcaggcgcattatctgcaccattaagggatcgctttggcgtattattaagattggag
tattatgatcatacttcacttgcagaaattgtcgtacgtagtgcgcatttatttgatgtt
gatattgagcaagtagcagctcttgaaatggcgacacgctcgcgtggtacaccccgtatc
gctaaccgtttgcttaaacgagtgcgagattatgcacaggtgcttggagatggtatgata
acggaaggacttgctaagcaagggcttgagctattacaagtcgatcctagagggcttgac
catattgaccataaacttgtgaccaatatgattgagcgcttccgtggtggccctgtaggc
ttagatacgttggcagcatctattggcgaggaacgcgtaacgatagaggatgtgtacgag
ccatatttgatgcaaattggctttatacaacggacgccacgtggacgtgtggcaacacat
ttagcctacgaacattttggatatgaatatccccaacaaacctag
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integrated database retrieval system
