Lysinibacillus agricola: FJQ98_21535
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Entry
FJQ98_21535 CDS
T07480
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lagr
Lysinibacillus agricola
Pathway
lagr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FJQ98_21535 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lagr03400
]
FJQ98_21535 (mutM)
Enzymes [BR:
lagr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FJQ98_21535 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FJQ98_21535 (mutM)
DNA repair and recombination proteins [BR:
lagr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FJQ98_21535 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QQP11738
LinkDB
All DBs
Position
complement(4305249..4306121)
Genome browser
AA seq
290 aa
AA seq
DB search
MPELPEVEGVVQALKPKIEGRTIQQVQLSEIIRLSFGEGKQCIVKQAEPDAFEITLSQMT
ITKIERRAKYIFFHLLKEDVPYVLVSHLGMTGAWFVVNSPEEINEAKFQKHIHATFQMAD
GGYLIYSDIRRFGELRFLTKIEDHAPLTKMAPEPFDEAACDYFIAKSKLPKYEKKAVKEV
IMDGQVISGCGNIYATEALFAQKIHPTRTMNRISEKRKRALFEAIVAILRQSIEAGGSTI
SDYRNINGEAGSMQNRLQMYGKKMCPTCGTATSQMTIGGRISVFCPNCQH
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggttgaaggtgtcgtccaggcattaaaacctaagattgaaggg
cgcacaattcaacaggttcaactgtctgaaattattcgtttgtcctttggggaaggaaaa
caatgtatcgtgaagcaagctgagcccgatgcatttgaaataaccttgtcccaaatgaca
attacaaaaattgaacgacgtgcaaaatacatcttttttcatttgctgaaagaggatgtt
ccttatgtacttgttagtcatttagggatgacaggtgcatggtttgttgtgaattcgcct
gaggaaattaatgaggcgaaatttcaaaagcatattcatgctacatttcaaatggcagat
ggtggctatttaatatactcggacatacgtcgctttggtgaattacgttttttaacaaaa
attgaggatcatgcaccattaactaaaatggcaccagagccattcgatgaagcagcatgt
gattattttattgcgaaatcaaagttaccgaaatatgagaaaaaggccgttaaggaagta
attatggatgggcaggttatttcgggctgtggcaatatttatgctacagaagcactattt
gctcaaaaaattcatccgacccgcactatgaaccgcattagtgaaaagcgtaagcgtgca
ttattcgaggcgattgtcgctattttacgccagagcattgaagcaggaggttcaacaatt
tcagattatcgtaatataaatggtgaggctggaagtatgcaaaatcgattgcaaatgtat
ggcaagaagatgtgtccaacgtgtggaactgcaacgagccaaatgacgataggtgggcgc
atatcagtcttttgcccaaattgtcaacattaa
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