Lysinibacillus agricola: FJQ98_21540
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Entry
FJQ98_21540 CDS
T07480
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lagr
Lysinibacillus agricola
Pathway
lagr03030
DNA replication
lagr03410
Base excision repair
lagr03420
Nucleotide excision repair
lagr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FJQ98_21540 (polA)
03410 Base excision repair
FJQ98_21540 (polA)
03420 Nucleotide excision repair
FJQ98_21540 (polA)
03440 Homologous recombination
FJQ98_21540 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lagr03032
]
FJQ98_21540 (polA)
03400 DNA repair and recombination proteins [BR:
lagr03400
]
FJQ98_21540 (polA)
Enzymes [BR:
lagr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FJQ98_21540 (polA)
DNA replication proteins [BR:
lagr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FJQ98_21540 (polA)
DNA repair and recombination proteins [BR:
lagr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FJQ98_21540 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJQ98_21540 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QQP11739
LinkDB
All DBs
Position
complement(4306134..4308761)
Genome browser
AA seq
875 aa
AA seq
DB search
MTKEKLLLLDGNSLAYRAFFALPLLTNDSGIHTNAVYGFTTMLQRILEEEQPTKILVAFD
AGKTTFRHETFTEYKGGRQKTPPELSEQFPYIRKLIDAYGIKRYELELYEADDIIGTLAK
EASSQDMDVIVVSGDRDLTQLATEQVTVYITKKGITEIEKNTPAFIAEKYGLAPGQIIDM
KGLMGDASDNIPGVPGVGEKTAVKLLKEHGSVESLYAAMDTVKTSKMKEKLVANEEQALM
SKKLATIFTDAPIDITLTDLGYNGPNEEELMNVWRELGFKSLLDKSDFTVQEEEQAPFDY
EIVQEVKQEHLKDVMAVHLELEDEHYHTCQQLGIALTDGAKTMYVPFDTAAKSDVLRLWL
EDATKIKYVSDSKASQAALKRAGIRLAGVEFDLLLASYINNPGLSGDDVATLAKELGYRN
VQANESVYGKGAKRAIPAMDVLAEHAGRKAFAVWSLQSKLETLLKENEQFELYKNLELPL
AFIFREMESEGITVNRATLEKMGQELNDKLIVIEQEIYAEAGEAFNINSPKQLGVILFDK
LGLPVIKKTKTGYSTAADVLEKLKPEHAIIEHILLYRQLGKLQSTYIEGLLKEIHEEDGK
VHTRFQQALTATGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSQEDWILFSADYSQIELRV
LAHMSKDKNLVEAFREGMDVHTRTAMDVFHVSADEVDSNMRRAAKAVNFGIVYGISDYGL
SQNLDITRKEAAIFIEKYFASFPGVKQYMDDIVQDAKFNGYVTTILNRRRYLPDITSSNF
NLRSFAERTAMNTPIQGSAADIIKKAMIDMDARLKKENMQAKLLLQVHDELIFEAPKEEI
ALLEKIVPEVMENAIELDVPLKVDFNYGATWYEAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggaaaaattgctattattggacggcaatagtttagcgtatcgcgcgttcttt
gcgttacctttattaacgaacgatagtgggattcatacaaatgcagtatacggctttaca
acaatgctacaaagaatattagaggaagagcaaccaacgaaaattttggttgcctttgat
gcaggtaagacaaccttccgtcatgagacatttacggaatataaaggtggtcgacaaaag
actccaccagaattatctgagcaatttccttatatacgtaagcttattgatgcttatggt
attaagcgatatgagcttgaattatacgaagcggacgatattatagggacacttgccaaa
gaagcttcatcacaggatatggacgtcatcgtcgtatcaggagatcgtgacttaacacaa
ctcgcgactgagcaggtaaccgtatacattactaaaaagggtattaccgaaattgaaaaa
aatacaccagcctttattgcagaaaaatacggcttagctcccgggcaaattattgatatg
aaaggtttaatgggagatgcttcagataatattcctggtgtaccaggtgttggtgaaaaa
acggctgttaaattgctgaaagagcatggttcagtggagtcgctttatgcggcaatggat
acggtaaagacttcaaaaatgaaagaaaaattagttgccaatgaagagcaggcactaatg
agtaaaaagcttgctaccatttttacagatgcaccaattgatataacgcttactgatctt
ggttataatggtccgaatgaggaagaattaatgaacgtgtggcgggagcttggctttaag
tcactactagataaaagtgattttactgtccaagaagaagaacaagcgccgtttgactat
gaaattgtgcaagaagtaaagcaagagcatttaaaggatgtaatggcagtgcacttggaa
ctagaggacgagcattatcatacgtgtcagcaactaggcattgcactaacagatggagcg
aaaacaatgtacgtgccgtttgatactgcggctaaatcagatgttcttcgtctctggtta
gaagatgctactaaaataaagtatgtgtctgattcaaaggcatctcaggcggcgttaaaa
cgtgcggggattcgtttagcgggtgttgaatttgacttattgcttgcctcttatattaat
aatcctgggctaagtggagatgatgtggcgacacttgcgaaagaactgggctatcgtaat
gtgcaggcaaatgagagtgtttatggtaaaggagctaaacgagctataccagccatggat
gtactggctgagcatgccggccgtaaagcctttgctgtgtggtcattacagtcaaagctt
gagacattgttaaaggaaaatgaacagttcgaactctataaaaacttagaacttccactt
gctttcatttttagggaaatggaaagtgagggtatcacggtcaatcgtgccacattggaa
aaaatggggcaagagctaaatgacaagctaattgttatcgaacaagaaatttatgcggag
gcgggagaagccttcaatattaattcaccaaagcaattaggtgttattctctttgataaa
ctaggtcttcctgttattaaaaagacaaaaacaggttattccactgcagcagatgtattg
gaaaaattaaagccagagcatgccattattgagcatattcttttgtatcgtcagcttgga
aaattacagtcaacatatattgaaggcttgctcaaggaaatccatgaagaggatggaaag
gtgcatactcgattccaacaagcattaacagctacagggcgtttaagctcaactgatccg
aatttgcaaaacatcccgattcgtttagaagaagggcgaaaaatccgtcaagcgtttgtc
ccatcgcaagaagattggatattgttttctgccgactattcacaaatcgaattgcgagta
ttggcccatatgtcaaaggataaaaatttagtagaagctttccgtgaaggtatggatgtt
catacacgtacagcaatggatgtattccatgtctcagctgatgaggtcgatagcaatatg
cgtcgcgctgctaaagcggtaaactttggtatcgtttatggtattagtgattatggctta
tcgcaaaatttagatattactcgaaaggaagctgctatatttatcgagaaatattttgcg
agcttcccaggtgtaaaacaatatatggatgatatcgtgcaggatgcaaaatttaatggt
tatgtgacaacgattttaaatcgacgtcgatatttacctgatattacgagctcaaatttc
aatctgcgaagctttgctgagcgtaccgcgatgaatacaccgattcagggaagtgcagct
gatattattaaaaaagcaatgattgatatggatgctcgattgaaaaaagaaaatatgcag
gcaaagctcctattacaagtgcatgatgaattaatttttgaagcacctaaggaggagatt
gcgctgcttgaaaaaatagtaccagaggttatggagaatgcgatcgagcttgatgtaccg
ctaaaagtggacttcaactacggcgcgacttggtacgaagcaaaataa
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