Lysinibacillus agricola: FJQ98_21635
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Entry
FJQ98_21635 CDS
T07480
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lagr
Lysinibacillus agricola
Pathway
lagr03030
DNA replication
lagr03430
Mismatch repair
lagr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FJQ98_21635 (dnaE)
03430 Mismatch repair
FJQ98_21635 (dnaE)
03440 Homologous recombination
FJQ98_21635 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lagr03032
]
FJQ98_21635 (dnaE)
03400 DNA repair and recombination proteins [BR:
lagr03400
]
FJQ98_21635 (dnaE)
Enzymes [BR:
lagr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FJQ98_21635 (dnaE)
DNA replication proteins [BR:
lagr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FJQ98_21635 (dnaE)
DNA repair and recombination proteins [BR:
lagr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FJQ98_21635 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
MamS_MamX
BRK
DUF7121
Motif
Other DBs
NCBI-ProteinID:
QQP11758
UniProt:
A0ABX7AP86
LinkDB
All DBs
Position
complement(4328828..4331911)
Genome browser
AA seq
1027 aa
AA seq
DB search
MTHVYTKMHTSADLLKSTIRLEQLVPFLQEQNTQACAIVNSKLYGLLPFCKALQQANIHA
VLGLSINVQWQERKVPLVLYAQTQEGYQHLLKISSAVSIREDDVLPWKWLEGYATGCMAL
LSSDDLVEMEDWTEVASALNKVFGKHLFMGIARPAGMIAEKEESYVTWCETENITMVASQ
SCYFLRPEDHFAFEVARAIDTGEKLTGTMLSAHVQGYFAPTAEEWRSWFADHPEWLDASA
AMLASCTAEIPEMHVQMPKFPVPTNETAESLLVKEAFTGLAERFKQTEIPQVYRERLQYE
LEIICSMGFADYFLIVADFMHFAKENRILTGPGRGSSASSLVAYSLSITQVDPLVYGLLF
ERFLNPERVTLPDIDIDFVDSKRQKVIHYVAQKYGKSNVAQIITFGTLSAKAVARDVARV
FGFEAETLEKISKMIPNKPGITLQRAVAESQGLQGWLAEDEQHRRWLEVALKLEGLPRNS
STHAAGIVLAPSPLVNTIPIEEGHDEIYCTQWPMGDVEACGLVKMDFLGLRNLTILEQVR
WSIYKAGGPWIEFELIPMQDEKTFQLLQMGDTLGIFQLESEGMKQALRDIHPTHFLDIVA
VNALYRPGPMDFIPAYARRKAGKEPVIMPHPALEPILRETFGVIVYQEQIMQIASVMAGF
TMGQADLLRRAVSKKNRQVLEEQRATFVNGAMKQGFDIPVAEDVYALIVRFADYGFPKSH
AVAYSVISYQMAYLKAHFPLSFYAALLSNATGNVEKIQQLLSEAKEKGIPFYPPSLKHST
KFFTVEKDGVRYSLSGIKGVPYTFIETVNALRQTNAEAFNNLFDLAVAVSAQHFKPKVME
SLIFAGALDYLDKDRAILIATLEAALKHAELLRPTDDIDIESATAFSFGKPKYMEAEAMS
QKEKLLHEKESLGFYISAHPVTEERAFWNEVNSTCRELKHAREGTYVKIIGMIEEVKKIR
TKKGEQMAFVQLQDEFGTVSVTLFPQVFHLVQELLLEDELLYIEGTLERRFGKPQVKVKH
AQTTKKI
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
ttgacacatgtatacacgaaaatgcatacgagcgcggatttattaaaaagcacgattcgg
cttgaacaattggtcccttttttacaagagcaaaatactcaggcctgtgcaatagtcaat
tcgaaattgtacgggcttttgcctttttgtaaagcattacagcaagcaaatattcatgct
gtattagggctttcgataaacgtacagtggcaggaaagaaaggttccacttgtgttgtat
gctcagacacaagaaggctatcagcaccttttaaagattagtagtgccgtttcgattagg
gaggatgacgtacttccgtggaaatggctggaagggtatgcaacaggctgtatggcatta
ctttcttctgatgatttagtagaaatggaggattggactgaagtagcgagtgctctcaac
aaggtatttggtaagcatttatttatgggtatagcaagaccagcaggaatgatagccgaa
aaagaagaatcgtatgtaacatggtgtgaaactgagaacataacgatggttgcctcacag
agctgttattttttacgtccagaagatcattttgcctttgaagttgcaagagcaattgat
acaggtgaaaagctcactggtacaatgttatcagcgcatgtgcaaggttatttcgctcca
acagcggaagaatggcgaagctggtttgcggatcacccggaatggcttgatgctagtgct
gcgatgttagctagctgtacagcggaaatccctgaaatgcacgtgcaaatgcctaaattt
cctgtgccaacaaatgaaacagccgaaagcttgcttgtcaaagaggcatttacaggatta
gcagagcgtttcaagcaaactgaaatccctcaagtttatcgggagcgacttcagtatgag
ctggaaattatttgttcaatgggctttgcagattattttttaattgttgcagattttatg
cattttgctaaagagaaccgtattttaactggccctggtcgtggttcatcagcaagttct
cttgtagcctatagtctatctattacacaagtagatccactagtttacggcttattattt
gaacgatttttaaatcctgaacgtgtcacactaccagatatagatattgattttgtcgac
agtaaaagacaaaaagtgatccactatgtcgctcaaaaatatggaaaatcaaatgtagcg
caaattattacatttggcacattatctgctaaggcagttgctagagatgttgcccgtgtc
tttggttttgaagctgaaacattggaaaaaatttcaaaaatgattccgaataaacctggg
ataacactgcaaagagctgtggccgaatcacaaggcttacaaggctggctagcagaggat
gagcagcatcgtcgctggttagaggtggcgttaaaactagaaggattgccaagaaattct
tctactcatgcggctgggattgtgctagcaccatcaccactagttaatacgataccgatt
gaagagggacatgatgaaatatattgtacgcaatggccaatgggagatgtagaagcttgt
gggcttgttaaaatggattttttaggtttgcgcaatctgacaatattagagcaggtgcgt
tggtcaatttataaagcaggtggcccttggatagagtttgagcttataccaatgcaagat
gaaaagacatttcagcttcttcaaatgggagatacattaggtatttttcaattagaatct
gaaggtatgaaacaagctttacgtgatattcatccaacccattttttagatatagtagca
gtcaatgcgttgtatcgtccgggcccaatggattttattcctgcctatgcaagacggaaa
gcagggaaggaaccggttattatgccacacccagcgttagagcccattttacgggaaaca
tttggtgttatagtttatcaagagcagatcatgcaaattgcctcggtgatggctggtttt
acgatgggacaagcggatttattgcgtcgagcagtaagtaagaaaaatcgtcaagtatta
gaggagcagcgtgccacatttgtcaatggagcaatgaagcaaggctttgatattcctgtg
gcggaagacgtgtatgcattaattgtgcgctttgcagactatggtttccctaaaagtcat
gctgtggcatatagtgttatttcttatcaaatggcctatttaaaggcacatttcccacta
agtttttatgctgcgttattatcaaatgcaactggaaatgtggaaaaaattcaacagctt
ctgagtgaggcaaaagagaaggggataccgttttacccaccctcattaaaacatagtacg
aaatttttcactgttgaaaaggacggagttcgctatagcttatctggaataaagggtgta
ccctatacatttatagaaacagttaatgccttacgccaaacgaatgcagaagcatttaat
aatttatttgacttggcagttgctgtaagcgcacagcattttaaaccgaaagttatggag
tctttaattttcgctggggctctcgattatttggacaaagatcgtgctatactgatagcg
acattagaggcagccttgaagcatgctgagttactacgaccaactgacgatattgatatc
gaatcggctactgcctttagttttggtaagccaaagtatatggaagcggaagcgatgtcg
caaaaggaaaaattattacatgagaaggaaagtctcggtttctatatttcggcccatcca
gtcacagaggaaagagctttttggaatgaagtaaatagtacgtgtcgagagttaaagcat
gcacgtgagggaacgtatgtgaaaataattggcatgatagaagaagtgaaaaaaatacgc
acaaaaaaaggggagcaaatggcttttgttcagcttcaggatgaatttggaacggtatct
gtaaccttattcccgcaggtttttcatcttgttcaagagctattacttgaagatgaattg
ctttatattgaggggacgctagaaagacgttttggtaagcctcaggtaaaagtaaaacat
gcacaaacgacaaaaaaaatatga
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