Lysinibacillus agricola: FJQ98_23015
Help
Entry
FJQ98_23015 CDS
T07480
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lagr
Lysinibacillus agricola
Pathway
lagr00260
Glycine, serine and threonine metabolism
lagr00460
Cyanoamino acid metabolism
lagr00630
Glyoxylate and dicarboxylate metabolism
lagr00670
One carbon pool by folate
lagr00680
Methane metabolism
lagr01100
Metabolic pathways
lagr01110
Biosynthesis of secondary metabolites
lagr01120
Microbial metabolism in diverse environments
lagr01200
Carbon metabolism
lagr01230
Biosynthesis of amino acids
lagr01240
Biosynthesis of cofactors
lagr04981
Folate transport and metabolism
Module
lagr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lagr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FJQ98_23015
09102 Energy metabolism
00680 Methane metabolism
FJQ98_23015
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FJQ98_23015
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FJQ98_23015
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FJQ98_23015
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FJQ98_23015
Enzymes [BR:
lagr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FJQ98_23015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QQP11965
LinkDB
All DBs
Position
complement(4597106..4598353)
Genome browser
AA seq
415 aa
AA seq
DB search
MENLFKEDPAIAKAIRQELYRQHNKIELIASENFVSEAVMEAMGTVLTNKYAEGYPGQRY
YGGCEHVDIVEELARERVKGLFDAEHANVQPHSGSQANAAVYFAAVNPGDTILGMNLSHG
GHLTHGSPVNFSGQLYHFVSYGVDEQTHLIDYDEVRKLAHEHKPRMIVVGASAYPRTIDF
EAFSEIAKEVDALFLVDMAHIAGIVAAGLHPNPVPHADFVTTTTHKTLRGPRGGVILCKK
SWAQAIDKAVFPAIQGGPLMHMIAAKAIAFKENSSSEFKQYMKNVLQNAKVLAEALIAEG
LNVVSGGTDNHLILLDLRNIKITGMDAQLLLDEIGITVNKNAIPFDPTSPQITSGIRLGT
PAITTRGMGPSEMIEIARIISQALKNPQDSTLIKLLSDEVKEITSGFILYERKIH
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggagaatttgtttaaagaagaccctgctatagcaaaagcaattcggcaggagctatat
cgacagcacaataaaattgaattgattgcttcggaaaactttgttagtgaagctgttatg
gaagcgatgggtacagtcctaacaaataaatatgcggaaggctatcctggacaaagatat
tatggaggttgtgagcatgttgacatagtagaagaattggctagagaaagagttaaaggt
ttatttgatgcagaacatgccaatgtacagccgcactcaggttcgcaggctaatgcagca
gtttattttgcagctgtaaatccaggagatacgattttaggcatgaatttatcacacggt
ggtcatttaacacatggaagtcccgttaatttctctggtcagctatatcattttgtttct
tatggtgtcgacgaacaaacccatctaatagactatgatgaagtgaggaaacttgcccat
gaacataaacctcgaatgattgtagtgggagcaagtgcttatccacgtacaatagatttc
gaagctttttctgaaattgctaaagaggtagatgcgttatttcttgtagatatggctcat
attgctggcattgttgcagctggtttacatccaaaccctgtaccacatgctgattttgta
acaacgacaacacataaaacactgcgaggtccaaggggaggagtcattttatgtaagaaa
tcctgggcacaagcaattgataaagcagtctttccagctattcagggtggaccgcttatg
catatgattgctgccaaagcgatagcatttaaagaaaattcctcctctgaatttaaacaa
tatatgaaaaatgtacttcagaatgcaaaagtattagctgaagcattgatagcagagggt
ttaaatgttgtatcgggaggtactgacaatcatcttatcctcttagatctgcgcaatatt
aagatcactggaatggatgcacaactactacttgatgagattggcatcacggtaaacaaa
aacgcaattccatttgatccgacaagtccacaaataacaagtggaattcgtcttggtacg
ccagccataactacaagaggaatgggaccaagtgaaatgatagagatagcacgtattatt
tcacaagcattgaagaatccacaagattcaacattaatcaaactacttagtgatgaggtc
aaagaaataacttcggggttcattttatatgagcggaagattcattga
DBGET
integrated database retrieval system