Lysinibacillus agricola: FJQ98_23110
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Entry
FJQ98_23110 CDS
T07480
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lagr
Lysinibacillus agricola
Pathway
lagr03420
Nucleotide excision repair
lagr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FJQ98_23110 (pcrA)
03430 Mismatch repair
FJQ98_23110 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lagr03400
]
FJQ98_23110 (pcrA)
Enzymes [BR:
lagr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJQ98_23110 (pcrA)
DNA repair and recombination proteins [BR:
lagr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJQ98_23110 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
FJQ98_23110 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
QQP11980
LinkDB
All DBs
Position
complement(4618334..4620586)
Genome browser
AA seq
750 aa
AA seq
DB search
MEQLTKNLLAGMNPEQENAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLVIEKEVYPSKIL
AITFTNKAAREMRERIDGILGNGTGDSMWVSTFHSMCVRILRRNIDQLGISRNFSILDST
DQLSVIKNVMKDENIDTKRFEPRAILNAISSAKNECITADDYAGQINENNPYEKTVAQVY
KGYEKRLRRNQSLDFDDLIMTTITLFKRVPEVLEYYQNKFQYIHVDEYQDTNKSQYLLVQ
MLAKKFKNICVVGDSDQSIYRWRGADIGNILSFEKDYPNAKAIMLEQNYRSTKRILQAAN
DVIQNNTTRYPKELRTENAEGEKIVLYKAYNEQEEAQFVVQTIQQHIQKENRSFDDFAIL
YRTNAQSRVMEEVLVKSNMAYQIVGGTKFYDRKEIKDLLAYLRLIANNDDDLSLARIINE
PKRSIGATSFEKMARYAIEQDRSIFDAMNDLVFMGLTGKAANSAEQFYAMIKGFTEMQEY
LSVTEIVEQVIDKSGYRAMLQNEKTIEAESRLENIEEFLSVTKAFEERSDEKSLIAFLTD
LALIADIDALDKEDTSKGNIILMTMHAAKGLEFPVVFIIGMEENIFPHSRSLDDMDEMEE
ERRLAYVGITRAEERLYLTSAQSRTIFGRSSYNNVSRFLGEISEDITESMSKGGTKPEVP
FASSNRSAGGYQKRTLGAIQKTQPATARLQTTGGDQFGWKAGDKAIHKKWGTGMVVSVKG
EGDGTELDIAFPQPVGIKRLLAQFAPIEKA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggagcagttaacgaaaaacttattagcaggtatgaaccctgagcaggaaaatgcggtt
aaaacaactgagggaccgcttctaattatggcgggggctggatcagggaagacacgtgta
ttgacacatcgtatagcatacttagtaatcgaaaaagaagtatacccatcaaagatttta
gcaatcacatttaccaataaagctgcacgtgaaatgcgtgagcgtattgatggcattctt
ggtaacggaactggtgatagtatgtgggtatcgaccttccactcaatgtgtgtgagaatt
ttacgacgcaatattgatcagctagggatatcacgtaatttttcaattttagattcgact
gatcagctatccgttattaaaaatgttatgaaggatgaaaatattgacacgaagcgtttt
gaaccacgtgcaattttaaatgcaataagttcagcaaaaaacgaatgtataactgcggat
gattatgcaggccaaatcaatgaaaataatccttacgaaaaaacggttgcccaggtttat
aaaggttatgaaaaaagactacgccgcaatcaatccctcgattttgatgatttgattatg
acaactattacattattcaagcgtgtacctgaagtgcttgaatactatcaaaataaattt
caatatattcatgtggatgagtatcaagatacgaataaatctcaatatttacttgttcag
atgctggccaagaaatttaaaaatatttgtgttgtaggtgattcagaccaatcgatttat
cgttggcgtggtgcggacattggcaatattctttcattcgaaaaggattatccgaatgct
aaggccattatgcttgagcaaaattatcgttcaacaaaacgcatcctacaagcagcaaat
gacgtcattcaaaataatacaacacgttatccaaaagaactgcgtacagaaaatgcagag
ggtgaaaaaatcgtattgtacaaagcgtataacgagcaagaggaagcacaattcgttgta
caaacaatccaacagcatattcaaaaagaaaatcgttcatttgatgactttgcgatactc
tatcgtacaaatgctcagtctcgtgtgatggaggaagtgcttgttaagtccaatatggct
tatcaaatagttggtggtactaagttctatgatcgtaaagagattaaggacttacttgcc
tacttgcgccttattgccaataatgatgatgatttatcacttgcacgtattatcaatgag
ccaaagcgtagtataggtgcaacctcctttgaaaaaatggcgcgctatgcgattgaacaa
gatcgctctatttttgatgcaatgaatgatcttgtattcatgggtctaacagggaaggct
gctaattcggctgagcagttttatgcgatgattaaaggctttacagagatgcaagaatat
ttatctgtgactgaaattgtagagcaagtcattgacaaatcaggttatcgtgcaatgcta
caaaacgaaaagactattgaagcggaaagtcgcttagaaaatattgaagagtttttatca
gtaacaaaggcttttgaggagcgtagtgatgaaaagagcttaattgcctttttaacagat
ttagctctaattgcagatattgatgcacttgataaagaggatacatcgaagggcaacatt
attttaatgacgatgcatgccgcaaagggcttagaattccctgtggtctttatcattgga
atggaggaaaatatcttcccacattctcgttcacttgatgatatggatgaaatggaagaa
gaacgtcgtctcgcttacgtaggtatcacacgtgcggaggaacgtttgtatttaactagt
gcacaaagtcgtacaatttttggtcgttctagctataacaatgtctctcgtttcttaggt
gaaatttctgaggatattacagaatcaatgtccaaaggtggtacgaagcctgaggttccg
tttgcctctagtaatcgttcagcaggtgggtaccaaaaacgtacacttggagcaattcag
aaaacacaaccagcaacagctcgtttacaaacaaccggtggagaccaatttggctggaag
gccggggacaaggcgatccataaaaaatggggaacaggtatggttgtcagtgtaaaaggt
gagggtgatggtacggagctagatatcgcctttccacaaccagttggcattaagcgatta
ttggcacagtttgcacctattgaaaaagcgtaa
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