Lysinibacillus agricola: FJQ98_23705
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Entry
FJQ98_23705 CDS
T07480
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
lagr
Lysinibacillus agricola
Brite
KEGG Orthology (KO) [BR:
lagr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lagr03021
]
FJQ98_23705 (sigB)
Transcription machinery [BR:
lagr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FJQ98_23705 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF1492
HTH_37
DUF134
GerE
HTH_10
TnsD
KORA
Sigma70_ECF
HTH_3
NirdL-like_HTH
HNF-1_N
HTH_ParB
MarR
HTH_24
HTH_Crp_2
PhyR_sigma-like
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QQP12071
UniProt:
A0ABX7AR32
LinkDB
All DBs
Position
complement(4745735..4746520)
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AA seq
261 aa
AA seq
DB search
MSKESLHKSSSKEDILRWIALYQSTEDDEAQTNLVIHYRYLVESIARKYSNGTSSYDDIT
QVGMLGLLGAIRRFDPNFGRSFEAFAVPTIVGEIKRFLRDKTWDVHVPRRIKELGPRIKA
TVEALTIELQRSPSIKEIADQLEVEEEEVLEAMEMSRSYHALSMDHSIESESDGSTVTLF
DITGKEDDGYEMTNKRILVSDAMSVLNEREKQIIQLTYLEQLTQKEVGERLGISQMHVSR
MQRKAIKKLQEAVLTSGGVSL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagaatcactacataaatcttcatccaaggaagacatactaaggtggattgcg
ttgtaccagtcgacggaggatgatgaagctcaaacaaatttagtgattcattatcgatat
ttagtggagtctattgcacgtaaatattcgaatggtacatctagttatgatgatattact
caagtaggtatgctggggttgctaggtgcaataagacgttttgaccctaattttggtcga
agctttgaagcgtttgctgtaccaacgattgttggagaaattaagcgctttttacgtgat
aaaacttgggatgttcacgtaccaagacggataaaagagttaggaccgcgtattaaagca
actgtagaagcactgacaattgagttgcagcgttctccatctattaaggaaatcgcggat
caattagaagtggaagaggaagaagttttagaggcaatggagatgagtcgtagttatcat
gctctttctatggatcattcaatagagtcagagtctgacggtagcacagtaacgctattt
gatattacgggtaaagaagatgacggctatgaaatgaccaacaaaagaatacttgtttct
gatgcaatgagtgttttaaatgagagagaaaaacaaataattcagcttacatatttagag
caactcactcaaaaagaagttggagaacgattaggaatttctcaaatgcatgtatctaga
atgcaaaggaaggcaataaagaaattacaggaagctgtcctaacaagcggtggggtttcg
ctctaa
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