Amylolactobacillus amylophilus: LA20533_01120
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Entry
LA20533_01120 CDS
T05031
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lah
Amylolactobacillus amylophilus
Brite
KEGG Orthology (KO) [BR:
lah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lah03019
]
LA20533_01120
Messenger RNA biogenesis [BR:
lah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LA20533_01120
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
DUF2790
Motif
Other DBs
NCBI-ProteinID:
APT19270
UniProt:
A0A1L6XE73
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All DBs
Position
complement(214431..215378)
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AA seq
315 aa
AA seq
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MKKISEYNVDEEMDIVVLLKHADVRTTKTGKQYLALTFEDTSGQIRGNFWDASSTDVDNY
QSGTVVELSGKKELYQNTPQVKIYGLRLVGEEEGFDMSQFVKAAPISVEDMQAELNKDVF
EITNPTWNRIVRFLLQKYQINFYSYPAAKTNHHAIKGGLAFHTLSMVRLAQSISALYPQL
NKPLLLAGTILHDLGKTIELTGPVGTEYTVTGNLIGHIVLIDEEIIKAATELKIDEQSED
FLVLRHMVLSHHGLQEYGSPVRPALMEADVLHEIDMLDASLYMMTEALDKTTPGQYTDRI
FALDNRRFYKPKLSE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ctgaaaaaaattagtgaatataatgtcgacgaggaaatggatatcgttgtcttactgaaa
catgcagatgtgcggacgacgaagaccgggaaacagtacctggctttaacattcgaggat
acttccgggcaaattaggggtaatttttgggatgcatcttctaccgacgtcgataactac
cagagcggtaccgtggtcgagctaagtgggaagaaggagctttaccagaatacgccacaa
gtcaaaatatacggtctccggttggttggtgaggaagagggctttgatatgagccaattt
gtcaaagccgcgccaatctcggtggaggatatgcaagcagaactgaacaaggacgttttt
gaaattacgaatccaacttggaatagaattgtgcgttttctgttgcagaagtaccagata
aatttctattcctatcccgctgctaaaactaaccatcatgcgattaagggtgggttagct
ttccacacactgagcatggtccggttggcccagtcaattagtgcactatatccgcagcta
aataagccgttacttttggccggtacgattctccatgacttgggtaagaccatcgagtta
acgggtcccgtgggaacagaatatacagtcaccgggaatctgattggtcatattgtcttg
atagacgaggaaatcatcaaagcggccacggagttgaagatagacgagcagtcagaggac
ttcttagtcttgcggcacatggtcctctcgcatcacggtctgcaggagtacggctcgcct
gtccgaccagcactcatggaggcagatgtgttacatgagatcgatatgttggatgcatcc
ctctacatgatgacggaagccttagacaagaccactccagggcaatacacggaccgtatt
ttcgccttggataatcggcgcttctataagccaaaattaagcgaataa
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