Amylolactobacillus amylophilus: LA20533_02335
Help
Entry
LA20533_02335 CDS
T05031
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lah
Amylolactobacillus amylophilus
Pathway
lah03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LA20533_02335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lah03021
]
LA20533_02335
03400 DNA repair and recombination proteins [BR:
lah03400
]
LA20533_02335
Enzymes [BR:
lah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LA20533_02335
Transcription machinery [BR:
lah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LA20533_02335
DNA repair and recombination proteins [BR:
lah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LA20533_02335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
SAM_EPH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
APT18183
UniProt:
A0A0R1YIB2
LinkDB
All DBs
Position
complement(417469..418407)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPSITAVEQDKNYGRFVIEPLERGYGTTLGNSLRRVLLASLPGSAVSYLQIDGVL
HEFSTIPGVLEDVTQIILNLKKLTLKSIAADEKLAEIDVEGPATVTAGDLKVDDEVQILN
PDQYIATVAEGAHLRMTVAIKQGRGYVPADQNKSDDMPIGVVPVDSLFSPIEKVNYQVEG
TRVGRNNDYDKLTMEVWTDGSITPNDALSFGAKILTEHLNVFMNTNLVTEFTDVMVEKED
TKKEKQLEMTIEELDLSVRSYNCLKRAGINTVQELTEKSEADMMRVRNLGRKSLEEVKNK
LTDLGLGLRVDD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatttgaaaaaccaagtattaccgctgtagaacaagataaaaattacggcaga
ttcgtaattgaacccttggaacgtggttatggtactactttaggaaattcacttcgtcgt
gttttactagcttctttaccaggaagcgcagttagttatctccaaattgatggtgtttta
catgaattttcaacaattcctggtgtattagaagacgttacacagattattttgaatctt
aagaagcttaccttaaagtcaatcgcggctgatgaaaagttagcagaaatcgatgtagaa
ggtcccgcaactgttactgccggcgatcttaaagttgatgatgaagttcaaattttgaac
cctgatcagtacatcgctacggttgctgagggagcacatcttcggatgactgttgccatt
aaacagggtcgtgggtatgttccagcggaccagaataaatccgatgatatgccgattggt
gttgtgccagttgattcactattttcacctatcgaaaaggttaactaccaagtcgaagga
acccgtgttggacggaacaacgactatgataagttaacgatggaagtttggacggatggc
tctattacacctaacgatgcattgagttttggtgccaagattttaaccgaacacctaaac
gtgtttatgaatacaaatcttgtaactgagttcactgatgtgatggtggagaaggaagat
actaagaaagagaaacaactcgagatgactatcgaagagcttgatctttctgttagatct
tacaactgcttgaaacgcgctggtattaacacagttcaagaattaactgagaagtccgaa
gcagacatgatgcgtgttagaaaccttggccgcaagtcgcttgaagaagttaagaacaag
ttaactgatcttggcttaggactacgtgtagacgattaa
DBGET
integrated database retrieval system
