Amylolactobacillus amylophilus: LA20533_02500
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Entry
LA20533_02500 CDS
T05031
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lah
Amylolactobacillus amylophilus
Pathway
lah03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LA20533_02500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lah03021
]
LA20533_02500
03400 DNA repair and recombination proteins [BR:
lah03400
]
LA20533_02500
Enzymes [BR:
lah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LA20533_02500
Transcription machinery [BR:
lah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LA20533_02500
DNA repair and recombination proteins [BR:
lah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LA20533_02500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
APT18216
UniProt:
A0A1L6XB69
LinkDB
All DBs
Position
complement(436061..439702)
Genome browser
AA seq
1213 aa
AA seq
DB search
MIDVNKFESMQIGLASPNKVRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTSSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDM
SPRLLEEVIYFAAYVVIDAGDTDLEDKQLLTEAEYREKRQQFGNAFNAKMGAEAIKELLH
NVDLETEVKDLKEDLKSAQGQKRTRAIRRLDILEAFRSSGNKPEWMVMDAVPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPTLKFYQCGLPRE
MALELFKPFVMHELVAREIASNIKNAKRKIDRQDNEVWDVLEDVIKERPVLLNRAPTLHR
LGIQAFEPVLVSGKAIRLHPLATEAYNADFDGDQMAIHVPLSDEAQAEARMLMLAAHHIL
APKDGRPIVTPSQDVVLGNYFLTQEQKNREGEGMIFNSTDEATIAYQNGQIHYHSRIGIS
AASMPEKPFPAGKENEVMVTTYGKAIFNQILPADFPYLNEPTTDNLVNGTPAKYFLNEGE
DIHDKLAEMELVGTFKKGFLSDIIAQVFKIYKVQRTSELLDDMKQLGYEISTISGITVGV
ADVPTLNEKKDIVNEAHKKVATVSKQFRRGLITDEERHDRVISIWSDAKDTIQQKLVDSF
DSNNPISMMSDSGARGNVSNFTQLAGMRGLMAAPNGGMMEVPVTSNFREGLSVLEMFMST
HGARKGMTDTALKTANSGYLTRRLVDVAQDVIVREADCGTDRGLNVSSITEGNEMIEPLF
DRLVGRYTQKTVFNPETHEEIVGRNVLLDEDLAQQIVDAGVQMVTIRSVFTCNTKHGVCQ
KCYGRNLATGEEVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGGEDITQGLPRVQEI
FEARNPKGRATITEVTGVISAIEENPAEHTREITVEGKTDTRTYSVPYTASVAVAEGDTI
HRGEKLTIGSIDPKELIRVRDVLSTENYLLDEIQKAYRMQGVEISDKHVEVMARQMLRKV
RILDPGETDILPGTLMDIREFTDRNRETIISGGIPATGQSVLLGITKASLETNSFLSAAS
FQETTRVLTDASIRGKNDPLIGLKENVIIGKIIPAGTGMPVYREMEPKVKTNKPESVYSI
ADIEKEMAKNEQE
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgacgtaaataagtttgaaagtatgcaaataggtctagcctcgcccaacaaggtt
agaagttggtcttatggtgaggttaagaagcctgagaccatcaactatcgtactttaaaa
cctgaaaaagacggtctgtttgatgaaagaatcttcggaccaaccaaagactgggaatgt
gcctgtggtaaatacaaacgtatccgttataaaggaattgtttgtgatcgctgtggtgtt
gaggttacgagctctaaagttcggcgcgagcggatgggtcacatcgagcttgctgcacca
gtaacacacatctggtacttcaagggtatccctagcagaatgggacttgtacttgatatg
agcccacgcttacttgaagaggttatctattttgcagcatacgtcgtaatcgacgctggt
gatactgaccttgaggataagcagctgcttactgaggcagaataccgtgagaaacgtcaa
caatttggtaatgcgttcaacgctaagatgggtgctgaagcaattaaagagttactccat
aatgttgatctagaaacagaagttaaagatttaaaagaagatttaaagagtgcacaggga
cagaaacggactcgtgcaattagaagactggatattcttgaggccttcagaagttctggc
aacaagccagagtggatggtcatggatgccgttccagtaatcccaccagatcttcggcca
atggtccaacttgaaggtggccgttttgccacaagtgacctgaacgacctgtaccgtcgt
gttattaaccggaacaaccgtttgaagaggttgcttgacttaaatgcaccaagtattatc
gtccaaaacgagaagagaatgctccaagaggctgtagatgccttgattgataatggtcgt
cgtggacgtccagttgccggtcctggtaaccgcccattgaagtcattgtcccacatgcta
aaaggtaagcagggacgtttccgtcagaacctacttggtaagcgtgttgattactccggt
cgttcggttatcgatgttggcccaactttaaagttctatcaatgcggtcttcctcgtgaa
atggcgctcgagttgttcaagcctttcgtgatgcatgaacttgtcgctagagaaattgct
tcaaacatcaaaaatgctaagcgtaagattgatcgtcaggataatgaagtttgggatgtc
ttggaagatgtaattaaggaaagaccggttcttttgaaccgcgcacctacgttgcataga
cttggtatccaagcatttgagcctgtgctagttagtggtaaggcaattagattgcaccca
ctcgcaacagaagcttataatgccgatttcgatggtgaccaaatggccatccatgttccg
ttgtcagatgaggcacaagctgaagcaagaatgctaatgcttgctgcgcaccacatccta
gcccctaaagatggtcgaccaatcgttacaccatctcaagacgttgtgttaggtaactac
ttcttgacacaagagcagaagaatcgtgaaggcgaaggaatgattttcaattcgactgat
gaggcaacaattgcttaccaaaatggtcaaattcactatcattcaagaattggtatctcg
gctgcttcaatgccggagaaaccattcccagcgggtaaagagaacgaagtaatggttact
acctatggtaaggccatctttaaccaaattctccctgctgacttcccttacttaaacgaa
ccgactacagataatcttgttaatggtacgcctgctaagtatttcttgaatgaaggtgag
gatatccatgataaactcgctgagatggaacttgtaggtaccttcaagaagggcttcttg
agcgatatcattgcccaagtgtttaagatttacaaggtacaacgtacttctgagttactt
gatgatatgaagcaattaggttatgagatttctactatttccggaatcaccgttggtgtg
gccgacgtgccaacattgaatgaaaaaaaagatatcgttaatgaggcacataagaaggtt
gccactgtatctaagcaattccggcggggattaatcaccgatgaggagcgccatgataga
gtaatcagtatctggtctgacgcaaaggatactattcaacagaaattggttgatagtttc
gattcaaacaacccaatctcgatgatgagtgattctggtgcccgtggtaacgtatctaac
tttacgcaacttgctggtatgcgtggtctgatggccgcacctaatggcggaatgatggaa
gttcccgttacctcgaacttccgtgaaggtctgtcagttctcgaaatgttcatgtcaacc
cacggagcaagaaagggaatgaccgatacggcacttaagactgccaactcaggttacctg
acccgtcgtttggttgacgttgcccaagatgtcattgtgcgtgaagcagactgtggcact
gaccgtggtttgaatgtcagctcaatcactgaaggtaacgaaatgattgaaccattgttc
gatcgcctggttggtcgttacacacagaagactgtctttaacccagaaacacacgaagaa
atcgtgggtagaaatgttctacttgacgaagacttagcacaacaaatcgttgatgctggt
gtgcagatggttacaattcgctccgtcttcacttgtaacactaagcacggtgtctgccag
aaatgttatggtagaaaccttgctactggtgaagaagttgaagttggtgaggcagttggt
actgttgctgcacaatcaatcggtgagccaggtactcaattgactatgagaaacttccat
accggtggtgttgctggcggtgaagatattactcaaggtcttcctcgtgttcaagaaatt
tttgaagcacgtaaccctaagggtcgcgcaacgattacagaagttaccggtgtaatttct
gccattgaggagaacccagcagagcatacccgtgagattaccgttgagggtaaaaccgat
acaagaacctacagcgttccttacacagccagcgtggctgtcgctgagggtgacacgatt
caccgtggtgagaagttgactattggttcgattgatccaaaggaactgattcgtgtcaga
gacgtcctctcaactgaaaactacttactcgacgaaattcaaaaggcctacagaatgcaa
ggtgttgaaatctcagataagcacgttgaggtaatggcacgtcaaatgcttagaaaagta
cggattcttgatccaggtgagaccgatatcttgccaggtactctcatggatatccgtgag
ttcactgaccgtaaccgagaaactatcattagtggtggcattccagctactggtcaatca
gtactgcttggtatcactaaggcttcacttgaaactaacagtttcttgtctgccgcatca
ttccaagaaacgacacgtgtcctaacagacgcatcaattcgtggtaagaatgatccactg
attggcttgaaggagaatgtcatcattggtaagatcatcccagctggtacaggtatgcct
gtctaccgtgagatggagccaaaggttaaaactaataagccagaatcagtgtactcaatc
gctgatatcgagaaagaaatggctaagaacgaacaagagtaa
DBGET
integrated database retrieval system
