Amylolactobacillus amylophilus: LA20533_06595
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Entry
LA20533_06595 CDS
T05031
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lah
Amylolactobacillus amylophilus
Pathway
lah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LA20533_06595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lah03019
]
LA20533_06595
Messenger RNA biogenesis [BR:
lah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LA20533_06595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
APT18936
UniProt:
A0A0R1YRQ9
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All DBs
Position
1260836..1262410
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AA seq
524 aa
AA seq
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MNNIILTILAVAVLMLLFGLGIVAGEKLRQAKHEKELDQATQTVAGILATARKEAENLKK
EKVLAAQDETHKYRQEVEAELKERRQELQKQENRLVQREETLDRKDELIEKKENQLARRD
EKLNEQQQELAHKDQVANDLIEQRQEELHRVAQLSEDEARKLILDDLKDSLVSERAQIIQ
DSNEQVKNSVDKFAKKLIVEAIQRSAADTVSETTVSVINLPNDEMKGRIIGREGRNIRSF
EALTGIDLIIDDTPEVVVLSGFDPIRREIAKRTLEKLIEDGRIHPARIEEMADKARKEVN
DDIYQAGESALMELGIHNMHPELIKVLGRLKYRTSYGQNVLDHSIEVAKLTAALAAELGL
DEKLAVRAGLLHDIGKAIDHEIEGTHVEIGVELAKKYHEPDVVVNAIASHHGDVEPISFI
SVLVSAADSISSARPGARSESLENYIRRLEKLETIANSYDGVKQAYAIQAGREIRIMVEP
DKVSDDQTVILAREIKNKIETELEYPGNIKVTLIREKRAVEVAK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaataacataattttgacaatcctcgcggtcgcagttttaatgctattattcggactc
ggtattgttgccggggagaaacttcgtcaagctaaacatgagaaagaattagatcaggct
acccaaacggtagctggaattcttgccactgccagaaaagaagcggagaaccttaaaaaa
gagaaggttttagctgctcaagatgaaactcacaagtatcgtcaagaggttgaggcagag
cttaaagaacggcgtcaagaacttcaaaagcaagagaaccggcttgtgcaaagagaagaa
acacttgatcgcaaggacgaactaattgaaaagaaagagaatcaattagcgcggcgcgac
gagaaactcaacgagcaacaacaggaattagcacataaagatcaagtagcaaacgactta
attgaacaaagacaagaagaactgcaccgggttgctcaactcagcgaagatgaggcccgt
aaactaatcttagatgacctaaaagatagtttagttagtgaacgtgcacaaattattcaa
gatagtaacgaacaggttaagaactctgtagacaagtttgccaagaaactgatagttgaa
gcaattcaacgctctgcagcagatacagtatctgagaccacggtctcagttattaatttg
ccaaacgatgagatgaaggggcgtattatcggacgtgagggccgtaatatccgctcgttt
gaggcactaaccggaatagatttaatcattgatgatacgccggaagttgttgtacttagc
ggttttgatccaattaggcgagagattgctaaacgcacactcgagaagctgattgaggat
ggtagaatccatcccgccaggattgaagagatggctgataaggcccgtaaagaggtcaat
gatgatatctatcaagccggtgaaagtgcgttgatggagcttggcatccacaacatgcac
cccgaattaattaaagtactaggtcgcttaaaatatcgtactagttatggtcaaaatgtc
ttggaccattcaattgaagttgccaaactaactgcagcacttgctgcggaacttggttta
gatgaaaaacttgcagtccgtgcaggattattacacgacatcggcaaagcaatcgatcat
gaaatagagggtacacacgtcgaaataggcgtggaattggctaagaaatatcatgagccg
gatgtagttgttaacgcaattgcttcccatcatggtgatgttgagccaatctcattcatt
tccgttctggtttcagcagcagactcaatctcctcggctcgtccgggtgcgcggtctgag
tcgcttgagaactacatcagacggcttgagaaactcgaaacaattgccaatagctatgat
ggtgtcaaacaagcatatgcaatacaagcaggacgcgagattagaattatggttgagcct
gataaagtgtcagacgatcaaaccgttattttagcccgtgaaatcaaaaataagatagag
accgagttggaatatccggggaacatcaaagttaccctaattagggagaaacgggcggtc
gaagttgccaaataa
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