Amylolactobacillus amylophilus: LA20533_07960
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Entry
LA20533_07960 CDS
T05031
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lah
Amylolactobacillus amylophilus
Brite
KEGG Orthology (KO) [BR:
lah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lah03032
]
LA20533_07960
03400 DNA repair and recombination proteins [BR:
lah03400
]
LA20533_07960
Enzymes [BR:
lah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LA20533_07960
DNA replication proteins [BR:
lah03032
]
Prokaryotic type
DNA Topoisomerases
LA20533_07960
DNA repair and recombination proteins [BR:
lah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LA20533_07960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
C1_2
Motif
Other DBs
NCBI-ProteinID:
APT19184
UniProt:
A0A0R1YL25
LinkDB
All DBs
Position
1519880..1521955
Genome browser
AA seq
691 aa
AA seq
DB search
MPKKNLVIVESPAKAKTIEKYLGRNYHVVASLGHIRDLPKSQMGIDFEHNYEPKYISIRG
KGETIKNLKKEAAKVDNVYLAADPDREGEAIAWHVSHILGLPDGSKNRVVFNEITKDAVK
NSFKTPRSIDMDLVDAQQARRVLDRIVGYSISPILWAKVKKGLSAGRVQSIALNLVITRE
KEIKAFNPEEYWTIDAEFAKGRTKFVSSFYGVNGKKKELKNNDEVKELLGQIDKNKPFDI
TAVVKKERRRQPAAPFTTSSLQQEANKRLNYKTRKTMMIAQQLYEGINLGKEGTVGLITY
MRTDSKRISSVAKHDAAKFIHEEYGEQFAAHKPQTVKNQEGAQDAHEAIRPSSVFRTPES
LKDILSRDQMRLYQLIWSRFVASQMTAAVYDTVRADIEQNGVTFRTNGSKIKFAGFTKVY
DLSDAKTSKKDELPELLEGEQVKLSKTDPAQHFTQPPARYTEASLVKALEENGVGRPSTY
APTIDTIQKRYYVKLEGKSFVPTDLGEIVDALIEEFFPDIVNIDFTAQLENDLDSVEEGQ
KNWVTVVDEYYKPFEKELTKADSEIEKVQIKDEPAGFNCDICGAPMVIKLGRFGKFYACS
RFPDCRNTKPIVKEIGVTCSKCHIGQVVEKKSKRNRLFYGCSRYPECDFVSWDRPIGRDC
PKDGHFLVEKKVKGGRRVVCPNGDYEEEIQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaagaatctcgtgattgtagaatcacctgctaaagccaaaactattgaaaaa
tatctggggcgcaattatcatgttgtggctagcctcggacatattcgtgatttgccaaag
tcgcagatgggaatcgatttcgaacataattatgaaccaaagtacatatccattcgtggt
aagggcgaaaccatcaagaatcttaaaaaagaggcggcaaaggttgataacgtttatctc
gcggccgatccggaccgtgagggtgaggccatcgcgtggcatgtgtcgcatattctggga
ttacccgatggctcaaagaaccgcgtggttttcaatgaaataacaaaagatgccgtgaaa
aattcgtttaagacgccacgttcgattgatatggatctagtcgacgcacagcaggctcgt
cgtgtcttagaccggatcgttggatactctatctcacctattctgtgggcgaaagtgaag
aagggtctgagtgctggtcgtgttcaatctatcgcactcaatctggttatcacgcgtgaa
aaggaaataaaggcgttcaatcctgaagagtactggacgattgacgcagagtttgctaaa
ggtagaaccaaatttgtcagctccttttatggtgtgaatggcaagaaaaaagagttaaaa
aacaacgatgaagtaaaagagttactgggtcaaatagataagaataaaccatttgacatt
actgcggtcgtcaaaaaggaacggcggcgccagccagctgctccctttaccaccagctca
ctccaacaagaagctaataaacggttgaactacaagactagaaagaccatgatgattgcg
caacagctttacgagggaattaacctcggtaaagagggcacggtcggtttgattacgtac
atgagaacggactctaagcggatctcaagcgttgctaagcacgatgctgctaagtttatt
catgaggaatacggggaacagttcgcagcccataagccacaaacggtaaagaaccaagaa
ggagcccaagatgcccatgaggcaatccggccatcaagtgtttttcggacgccagagagc
ttgaaagacatcctctcgcgggatcaaatgcgactataccagctgatttggtctcgcttc
gttgccagtcagatgaccgcagcggtttatgataccgtacgggcggatatcgagcaaaat
ggtgttacttttaggaccaacggctccaagattaaatttgcgggtttcacgaaagtatat
gatctgagtgatgcgaaaacaagtaagaaggacgaattaccagagcttttggagggtgag
caggtcaaactttctaagaccgatcctgcacagcacttcacgcagccgccagctcgttac
acagaagcaagcttagtcaaagcgcttgaggagaatggcgtcggtcggccatcaacttac
gcaccgacgatagatacgattcaaaaacgatattacgtgaagctcgaagggaagtcgttt
gtgccgactgacttgggtgaaattgtcgatgcgttgattgaagagttcttcccagatatt
gtaaatattgacttcacagcgcaacttgaaaatgatctagactccgtcgaagaaggtcag
aagaattgggtgactgtggtcgacgagtactacaagccatttgagaaagagctgactaag
gcagactctgaaatcgagaaagttcagataaaggatgaaccagccggcttcaattgtgat
atctgtggtgcaccgatggtcattaaactaggccgtttcggtaagttttatgcttgttca
cgtttcccagattgtcgtaacaccaagccgatagtcaaggaaattggcgtgacatgttcg
aaatgtcatattggccaagtggttgagaagaaatctaagcgtaacagattattttatggt
tgttctcgctatccagaatgtgatttcgtttcatgggaccggccaattggccgagactgt
cctaaggatggccatttcttggttgagaagaaggttaagggcggtcgccgggttgtgtgt
ccgaacggtgattacgaagaagagattcaaaaataa
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