Amylolactobacillus amylophilus: LA20533_08155
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Entry
LA20533_08155 CDS
T05031
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lah
Amylolactobacillus amylophilus
Brite
KEGG Orthology (KO) [BR:
lah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lah03400
]
LA20533_08155
Enzymes [BR:
lah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LA20533_08155
DNA repair and recombination proteins [BR:
lah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LA20533_08155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
PDDEXK_1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
APT19219
UniProt:
A0A0R1YPP5
LinkDB
All DBs
Position
complement(1564243..1567902)
Genome browser
AA seq
1219 aa
AA seq
DB search
MSEVTYTPEQSQAINDQDLDILVSASAGSGKTKVLVERVLQKILNQSNPTPVSKLLIVTF
TEAAASEMKEKIQTAIEKAIAAPENQNNDFLNQQLVDVQTANISTLHAFCLDVIRRFYYV
IDLDPTFSLLTDETQAQLLREQSLANVFNRHFEEGDQEFISFIENFTGDRDFETAKAIIL
DLYYTAIAMPDYESLFEQARRLHSVPDTGLIHAPIFVDHITPDLIHQFRELITTIADTLR
PELTEIPQLEKISNSITALQENIQRFVTGLENDASFDELREILGNSTFNRTAKSGKWDEE
VKEGYDQLAAVRTAAKDLIKETWTKYFAFTEAEQAAEIETSRKYLAELIQLEREFIAEYA
TQKRAKNFLDFNDLEQFAYQILNPRNTATNNQMAQEFYQNKFAEILVDEYQDTNPIQEQI
VLSIKKSHKNNMFMVGDVKQSIYAFRQAEPQLFMKKYVAFNDDNPANERITLAENFRSSK
KVTNFVNKLFVPLMTTDFGELNYESEGQLKPAANYPKDLADAVEVSLFDKNNQEVPTTEE
HAGEQVDSAPELDFNEIQMVIKRIQMMQHDHYQIFDPEIGRKREFKLSDIAILTPTRTNN
LNIMEQFAHAGISLFISDAQNYFQTLELTMIMSYLKIIDNPDQDIPLVSVMRSPMYGFTE
PELARIRISNQHTSFYKVLIAFGDQTPLSQKVAAFLKDLNEFRTFEKLHRISELIWQIYE
QTRLVDLVTGLPNGRQRRVNLQALYERASSYESAGFKGLYQFITFIGRMQKSKKDLAQPL
LADAADNSVRLMTIHGSKGLEFPIVFLVGLSGKFNTSDFNADYIIDSRAGIGLTNKHEYI
KINTVIKNALAQESKKRLLEEKARVLYVALTRAGQKLILICAPNKLEQLISKFEQSKLTL
TDKLNAQNFLDLMGPQLDIFHQLIKSTPDLTNELQEKENVVFIRYNPVDLIGLSSDESDQ
LTHDVSQSDQEPTDLLLAQAKQLFDFHYGFLAATKTTAYQAVSEIKQLFNDPDIVQLQNS
QIVRATNRYLQPIEAKPAFLTSNNYGAADIGTATHLILQKHDFRQQANLDILRTEISKLV
NTNQLDQALADKVDLTSIINFLKSSLAKDISQHTTTLLREVSFSTLIKASNLFKYYNDEA
GKILVHGTIDGYYETERGIVLFDYKTDHLDPGDAGLTKLAAKYTGQLRLYQKAIEEFTGQ
PVLHKYLIALSTNELIEID
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggtaacttacacaccagaacaaagtcaagcaattaatgaccaagacctagac
atcctggtctcagcttcagccggctctggtaagaccaaggtactggtcgagcgagtatta
cagaagattcttaatcaaagtaaccctactcccgtcagcaaactgctcattgtcacgttc
actgaggctgcagcaagcgagatgaaggagaagatccagactgcgattgagaaggctatt
gctgcgccagagaatcagaataacgatttcctcaaccaacagttggttgacgtgcagacg
gccaatatttctaccctgcatgcattttgtttagacgtgattcgccgtttttactatgtc
atagaccttgatccaaccttctcgctcctaaccgacgagactcaggcacaattgctgagg
gaacaatcattggctaacgtctttaacaggcacttcgaggaaggagatcaagagtttatt
agctttatcgagaatttcaccggtgatcgcgattttgaaactgctaaagccattatctta
gatctgtactacacggctattgcgatgcccgactatgaatcattattcgagcaggctaga
cgcctccattctgtgccggatactggcctaatccatgcgccaatttttgttgaccatatt
acgcccgacctaatccaccaattcagggaattaataacgacgattgctgacacgcttaga
ccggaactgacagaaattccccaacttgaaaaaatcagcaattcgatcactgctttacaa
gagaatattcagcgttttgttactggcctagaaaatgacgcttcctttgatgaattacgt
gaaattctgggtaatagcaccttcaacagaacagctaagagcggcaaatgggacgaggaa
gttaaggaaggttatgaccaacttgccgctgtcagaaccgcagctaaagacctcatcaaa
gaaacgtggaccaaatactttgcctttacggaagcagaacaggctgccgaaatagaaact
agccggaaatatctggctgagttaatccagctcgaacgtgaatttattgccgaatacgcc
acccaaaaacgggccaagaattttctagacttcaacgatttggagcagtttgcttaccaa
attctaaacccgagaaacacagccaccaacaaccagatggcgcaagaattttaccagaac
aaatttgcagagatattggtggatgagtatcaggatacgaatcccattcaggagcaaatc
gtcctctcaatcaagaagagccataaaaataacatgttcatggtcggtgacgtcaagcaa
tcaatctacgcctttcggcaggcggaaccccagctttttatgaagaaatacgttgccttc
aacgatgataatccagcaaatgagcgaatcacgcttgccgaaaatttccgctctagcaag
aaggtcactaacttcgttaataagctatttgttcccctaatgaccacggattttggtgaa
ctaaactatgagtctgaaggtcaactaaagccggcagcaaactatcctaaagacctggcg
gatgctgttgaagtctccttgttcgacaagaataaccaggaagtgccaacaacagaagag
catgcaggtgagcaggttgatagtgcgccagaactggacttcaatgagattcagatggtc
attaagcgaattcaaatgatgcagcatgatcattaccagattttcgacccagaaattggc
cgcaagcgcgagtttaagcttagtgatattgccatcctcacccccactagaacaaataac
ctcaatatcatggaacaatttgcgcacgcaggcatctctttgtttatttccgatgcccag
aattactttcagacacttgaactgacgatgattatgtcctatctcaaaataattgataac
ccagatcaggatataccattagtcagtgtgatgcggtcaccgatgtacggcttcaccgag
cctgagctagcgcgaattcgcattagtaatcagcacacaagtttttataaagtgctaatt
gcgttcggtgatcaaacaccgctttctcaaaaagttgcagcttttttgaaggatctcaat
gagtttcggacatttgaaaagcttcatcgaatatccgaactcatctggcaaatatacgaa
caaacgagacttgttgatctggtcactggattgccaaacgggcggcaacgccgggttaac
cttcaggcactttacgaacgagctagcagttacgagagtgctggcttcaagggcctctat
cagttcattacctttattggccgcatgcaaaagagtaagaaggatctggcacagccttta
ctagccgatgcagccgataattccgtgcggctcatgacaatccacgggagcaaggggtta
gagtttccaattgtctttctagtaggattaagcggcaagtttaacacatcagactttaat
gccgactacattattgacagtcgtgcgggtatcggactcacgaataagcatgagtacatc
aaaatcaacacggtaatcaagaacgcactcgcacaggaatcaaagaagagactactcgag
gaaaaggcccgcgtgctctacgttgcattgacccgcgccggtcagaagctgattctgatt
tgtgcaccaaataaattagagcagctaattagtaaatttgaacaatcaaagctcacgtta
actgataagttaaacgcccagaattttctcgatctgatgggaccccaactagacattttc
catcagcttatcaaatcgacgccagacttaacgaacgagttacaggaaaaggagaacgtc
gtcttcattaggtacaacccggtcgatctgatcggtttatcatctgatgagtctgaccaa
ttgacacacgacgttagtcagagtgatcaagagccaaccgatcttttactggctcaggcc
aagcaactattcgactttcattatggcttcttggcagcgactaagacaactgcctaccaa
gcggtatcggagattaagcagttgtttaatgatccggatatcgtccagttacaaaactcc
cagattgtgcgtgcaacaaacagatatcttcagcccatagaagcaaaacctgcatttttg
actagcaacaactatggcgcggcggatattggtactgcaacgcacttaatcctgcaaaag
cacgactttaggcagcaggcaaacctggacattctaagaactgaaatcagcaaattagtt
aacaccaatcaactcgatcaagctttggcggataaagttgatctcacttcaatcattaac
tttttgaagtcgagccttgcaaaggacattagtcagcatacgaccacgctcttacgtgag
gtctctttctcaactctgattaaagcctcaaatctttttaaatattacaacgatgaggct
ggcaaaattcttgttcatggtacaattgatgggtattacgagacggagcgaggaatcgtg
ctcttcgattacaagacagatcatctagacccaggggatgcaggactaacaaagttagca
gctaagtataccggacaactacgtctgtaccaaaaggcgattgaggagtttacgggtcaa
ccagtgctacacaagtacctaatcgcgctcagtacaaacgagctaatagaaattgattaa
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