Lactobacillus amylovorus 30SC: LAC30SC_01555
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Entry
LAC30SC_01555 CDS
T01436
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lai
Lactobacillus amylovorus 30SC
Pathway
lai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LAC30SC_01555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lai03021
]
LAC30SC_01555
03400 DNA repair and recombination proteins [BR:
lai03400
]
LAC30SC_01555
Enzymes [BR:
lai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LAC30SC_01555
Transcription machinery [BR:
lai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LAC30SC_01555
DNA repair and recombination proteins [BR:
lai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LAC30SC_01555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF961
Motif
Other DBs
NCBI-ProteinID:
ADZ06502
UniProt:
F0TIJ5
LinkDB
All DBs
Position
316833..317771
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITVVEQEDSYGKFVVEPLERGFGTTLGNSLRRVLLTSIPGTGLVYVQIDGVL
HEFSTVPGVREDVTKIILNLKKLELKSLSDEQKVIELDVEGPATVTADDLKVDADVQVLN
PDQYICTIAEGGHLHMELAVKNGRGYVTASDNKSDDMPIGVIPVDSLFSPIKKVNYQVES
TRVGKRDDFDKLTFEIWTDGSIKPNDALSFAAKILVEHFKVFESADANTQFSEVMVEKED
DKKEKKLEMTIEELDLSVRSYNCLKRAGINTLQELTDKTESDMMRVRNLGRKSLEEVKNK
LADLGLSLRQED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaaccaaatattaccgttgttgaacaagaagattcttacggtaag
tttgttgttgaaccacttgagcgaggctttggtactactttaggtaattctttaagaaga
gttttacttacttctattccgggtactggacttgtttatgtgcaaattgatggcgtttta
cacgagttctcaacagttcctggcgtcagagaagatgtaaccaaaattattctgaacttg
aagaaacttgaattaaagtctctttcagatgaacaaaaggttattgaattagacgttgaa
ggtcctgccacagtaactgctgatgatcttaaagttgatgcagacgttcaagtcttgaat
ccagatcaatatatttgtaccattgctgaaggtgggcatttacatatggaactcgccgta
aagaatggtagaggatatgtaactgcaagtgacaataagagtgatgacatgccaatcgga
gtaattcctgttgattcattattctcaccaattaaaaaggttaactaccaagttgaatca
actcgtgttggtaagagagacgatttcgacaagctcacttttgagatttggactgacggt
tcaatcaagcctaatgacgcccttagttttgctgctaagatcttagttgaacacttcaag
gtatttgaatcagctgatgcaaatactcaattcagcgaagtaatggtggaaaaggaagac
gataagaaggaaaagaagcttgaaatgacaattgaagagcttgacctttctgttcgttca
tacaactgcctgaaacgtgccggcattaacactcttcaagagttaactgataagacagaa
tcagatatgatgcgtgtacgtaacttaggacgtaaatcattggaagaagttaagaataaa
ttagccgacttaggtctttcacttcgtcaagaagactaa
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