Lactobacillus amylovorus 30SC: LAC30SC_07015
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Entry
LAC30SC_07015 CDS
T01436
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lai
Lactobacillus amylovorus 30SC
Brite
KEGG Orthology (KO) [BR:
lai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lai03016
]
LAC30SC_07015 (truB)
Enzymes [BR:
lai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LAC30SC_07015 (truB)
Transfer RNA biogenesis [BR:
lai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LAC30SC_07015 (truB)
Prokaryotic type
LAC30SC_07015 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADZ07517
UniProt:
F0TFM3
LinkDB
All DBs
Position
complement(1355314..1356207)
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AA seq
297 aa
AA seq
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MLNGILVIDKDKDMTSADVVYHLRRALHIRKIGHAGTLDPEVTGVLPIAIGQATKLIELM
HTRPKKYEGQGLLGYATDSYDATGTVLKEEKLDHPFTTEEIQAGMDSFKGEIEQVPPIYS
AVKVNGKHLYEYAREGIAVERPKRTVDIYDYLLIDKPVFDEEKGQESFGFEIECSKGTYV
RSLVNDLGEKLGKPAVMTELRRTASSGFDISQAVKLSEIEANPEKADELIQPIDAFFTNY
ETIDLSDDQWKKVQNGAWIKLETDAKKVALRYNKKVKAIYENKGRLYCPSLMLLQNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatggaattttagtgattgataaagacaaggatatgacaagcgcagatgttgtt
taccatttgcgtcgtgcgttgcatattagaaaaattggtcatgctggtacattggatcct
gaagtaacgggagttttgcctattgcaattggtcaagctaccaaattaatcgaattgatg
cacacacgtcctaagaagtatgaaggccaaggcttgttgggttacgctactgattcatat
gatgcaacgggtacggttttaaaggaagaaaagcttgatcatccttttactactgaagag
attcaggctggaatggattcttttaagggcgaaattgagcaggttccaccgatttattca
gcggttaaagtaaatggtaagcacttatatgaatatgcccgtgaaggtattgctgttgag
cgtcctaagcgaacagttgatatctatgactatcttttaatagataaacctgtttttgac
gaagaaaaaggtcaagaaagttttggcttcgaaattgaatgcagtaaaggaacctacgtt
agatcattagttaatgatttaggagaaaaactaggtaagccagccgttatgaccgaatta
agaagaactgctagttctggctttgatatctcacaagcagtaaaattaagtgagattgag
gcaaatccggagaaagctgatgagttgattcaaccaattgatgcctttttcaccaattat
gaaactattgatttatcagatgatcaatggaagaaagtacaaaatggtgcttggattaag
ttagaaacagatgccaaaaaggtagctttaaggtacaataaaaaagttaaggcaatttat
gagaataaggggagactctattgcccaagtctaatgttgcttcaaaatgaataa
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