Lactobacillus amylovorus 30SC: LAC30SC_08375
Help
Entry
LAC30SC_08375 CDS
T01436
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lai
Lactobacillus amylovorus 30SC
Pathway
lai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LAC30SC_08375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lai03400
]
LAC30SC_08375
Enzymes [BR:
lai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LAC30SC_08375
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LAC30SC_08375
DNA repair and recombination proteins [BR:
lai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LAC30SC_08375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Auto_anti-p27
Zn_ribbon_TFIIB
Zn_ribbon_IS1595
NFACT_N
DZR
Zn_ribbon_8
Zn_Tnp_IS91
DUF7573
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
ADZ07776
UniProt:
F0TGD2
LinkDB
All DBs
Position
complement(1616810..1617640)
Genome browser
AA seq
276 aa
AA seq
DB search
MPEMPEVETVRRTLTPLIKGKTIEKVILWYPKIVATDHDKFINELPGKKIIRIDRYAKYL
LIRLNDNLTIVSHLRMEGKYHLTTPEVPKDKHDHVEFIFTDGTALRYNDVRKFGRMQLVL
TGTELQTTGIGKLGVEPNTPEFSEQYFLSSLKRKKKNIKNVLLDQTVVAGLGNIYVDETL
WQSKIHPLSLANKIPADKVEDLRKNINETIKIAIEKRGTTVHSYLDANGEVGGYQEMLQV
YGHAGEACPRCGTTLEKIKVSGRGTTFCPHCQVIYK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaatgcccgaagttgaaactgtacgaagaactttaactcctttaattaaagga
aagacaattgaaaaagtaattttgtggtatcccaaaatcgttgcgacggaccatgacaag
tttatcaatgaactgccaggcaaaaagattattcgcatcgaccgctatgccaagtattta
ttgattcgcttgaatgataatttaacaattgtgtcgcacttacgcatggaaggaaagtat
catttaactacgccggaagtgcctaaagacaagcatgatcacgtagaatttatttttacc
gacggcactgccttgcgttataacgatgtgcgcaaatttggccgtatgcagctagttttg
accggaaccgagctacaaacaactggcatcggtaaactgggcgttgaacccaatacgccg
gaatttagtgagcagtattttttgtctagcttaaagagaaaaaagaagaacatcaaaaat
gtcttgctcgatcaaactgttgttgcaggtttaggcaatatctatgtggatgaaactttg
tggcaaagcaagatccatcccttgagtttggctaacaaaattcctgccgataaagtagaa
gatctgcgtaaaaatattaatgaaaccatcaaaattgccatagaaaagcgcggtacaact
gttcatagctatttggatgcaaacggcgaagttggtggttaccaagaaatgctacaagtt
tacggccacgccggtgaagcatgtcctagatgtggcacgactttggaaaagattaaggtt
tcaggaaggggcaccactttttgccctcattgtcaggtgatttataaatga
DBGET
integrated database retrieval system
