Lactobacillus amylovorus 30SC: LAC30SC_08380
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Entry
LAC30SC_08380 CDS
T01436
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lai
Lactobacillus amylovorus 30SC
Pathway
lai03030
DNA replication
lai03410
Base excision repair
lai03420
Nucleotide excision repair
lai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAC30SC_08380
03410 Base excision repair
LAC30SC_08380
03420 Nucleotide excision repair
LAC30SC_08380
03440 Homologous recombination
LAC30SC_08380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lai03032
]
LAC30SC_08380
03400 DNA repair and recombination proteins [BR:
lai03400
]
LAC30SC_08380
Enzymes [BR:
lai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAC30SC_08380
DNA replication proteins [BR:
lai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LAC30SC_08380
DNA repair and recombination proteins [BR:
lai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LAC30SC_08380
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAC30SC_08380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Polysacc_deac_2
DUF61
HHH_5
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
ADZ07777
UniProt:
F0TGD3
LinkDB
All DBs
Position
complement(1617649..1620312)
Genome browser
AA seq
887 aa
AA seq
DB search
MADKKLLLIDGNSVAFRAFYALYRQLESFKSPDGLHTNAIYAFKNMLDVLLKDIDPTHVL
VAFDAGKVTFRTKMYGEYKGGRAKTPEELLEQMPYIQEMLHDLGIKTYELKNYEADDIIG
TFVDKGEKNGFTTTIVTGDRDLTQLASDKTTVEVTKSGVSQLEAYTPEHMKEVNGVTPTE
FIDMKALMGDSSDNYPGVTKVGPKTASRLIQKYGSVEGIYDHIDEMKKSKLKENLINDKD
KAFLAKKLATIDRDSPVTLDIDDIKRQPVDYEKLRQFYEKMNFRKFLADLNASGAGQDST
EVEKVEYIVLNDDNVKDVKATEKDTVEFYLEMLGANYHLADFVGFSLKINDKIYVSRDVE
LLEEDNIKHILEDEKIKKNVFDLKRTMVAAHRLGIHTHGLDYDMLLASYLINNENNSNDL
GEIAHLYGDYSVKTDLEVYGKGKSEHIPDDDDELFNHLASKVNAIEKLKPELLKKLKEHE
QDALFDTIEIPTARVLARMEMNGMKVEASTLIQLQNEFTVKLKELEDKIYGQAGEKFNLN
SPKQLGHILFEKLGLPVIKKTKTGYSTSVEVLDQLKTQSPIVSEILDYRQIAKIQSTYVK
GLLDVIQPDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPSEPDGYIF
SCDYSQVELRVLAHVSGDQNMQEAFKTGYDIHSHTAMKIFHLDSPDQVTPLMRRHAKAVN
FGIVYGISDYGLSKNLGISRKRAQEFIDNYFEQYPQIKDYMDKAVQEARDKGYAETIMHR
RRYLPDIHAKKYTVRAFAERTAINSPIQGSAADIIKIAMINMQKKLDELHLKTKMVVQVH
DELIFDVPKDELETIKKIVPEVMQSAVKLDVPLIADSGWGHNWYDAK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaaaaattacttctaatcgatggtaactctgtagctttcagagccttttac
gctctttatcgtcaactagaatctttcaagagtccggacggcctgcacactaatgccatt
tacgcttttaagaacatgctcgatgtccttttaaaagatattgatccgacccacgtattg
gtagcttttgatgcaggaaaagtcacttttagaacaaaaatgtacggcgaatacaaaggc
ggacgtgcaaaaactccggaagagttacttgaacaaatgccttatattcaagaaatgctt
cacgatctgggcattaaaacttacgaattaaagaattacgaagccgacgatattattggt
acttttgttgataaaggtgagaagaacggctttacaaccacgatcgtaactggtgaccgc
gacttgacccaacttgcgtccgacaagacgactgtcgaagtaactaaatctggtgtttct
caacttgaagcttatacaccagaacatatgaaggaagttaatggggtaactccaaccgaa
ttcatcgacatgaaggctttgatgggtgatagttcagataattatccaggtgttacaaaa
gttggccctaaaactgcatcacgtttgattcaaaaatacggttccgttgaagggatttac
gatcatatcgacgaaatgaagaagtccaagctgaaagaaaacttgatcaacgataaggac
aaagcatttttagctaaaaagttagcaactattgaccgtgattcaccagtaactctggat
attgatgatataaaacgtcagccagttgattatgaaaagctgcgtcaattctacgaaaag
atgaacttccgcaagttcttagctgatttaaatgcttcaggtgctggtcaagatagtact
gaagttgaaaaagtagaatacatcgttttaaacgatgacaacgttaaagatgttaaagcc
actgaaaaagacactgttgaattttatctagaaatgctcggtgctaactaccacttagcc
gattttgtcggctttagcttgaagattaacgacaagatctacgtttcaagagacgttgaa
ttgcttgaagaagataatatcaagcacatcttagaagacgaaaagattaagaagaatgtc
tttgacctgaagagaacaatggttgctgcacatcgtttgggcattcacactcacggcctt
gattacgacatgcttttagcatcctacttgatcaataatgaaaataactctaacgacctt
ggtgaaattgctcacctttatggtgattactccgttaagactgacctcgaagtttatggc
aaaggtaagagtgagcacatccctgatgacgatgatgaattattcaaccacttagcttca
aaggtcaacgccattgaaaaacttaagccggagcttcttaaaaagcttaaagaacacgaa
caggatgctttgtttgacacaatcgaaatcccaaccgcgcgcgttttagccagaatggaa
atgaacgggatgaaggtcgaagcaagtactttaattcaactgcaaaatgaatttaccgtt
aaattgaaggaactcgaagacaagatttatggccaagccggtgaaaagttcaacttgaac
tcaccaaagcaattaggtcacattttgtttgaaaagcttggtttgccagtcatcaagaag
accaagactggttattcaacttcagttgaagtcttggatcaattaaagacgcaaagtcca
atcgttagtgaaattttggattaccgtcaaattgccaagattcaatctacctatgtaaag
gggctgcttgatgttatccaaccagatggccgcgtccatacacgttacttgcaaactttg
actgccactggtcgtctttccagtgtggatcctaacttgcaaaacatccctacccgtacc
gaagaaggaaagcaaatcagaaaagctttcgtgccaagtgaaccagacggctacattttc
tcttgcgactactcacaagttgaacttcgtgttttagctcatgtttctggtgatcaaaac
atgcaagaagccttcaagaccggttatgatattcactcacataccgcgatgaagattttc
cacttggattcacctgatcaagtaacaccactgatgcgtcgccacgctaaagccgttaac
ttcggtattgtttacggcatttctgattacggtttgtccaagaacttaggcatttctaga
aaacgtgctcaagaatttatcgacaactacttcgaacaatatcctcaaatcaaggattac
atggataaggctgtgcaagaagcgcgtgacaaaggctatgccgaaacaattatgcaccgt
cgcagatacttgccagatattcacgctaagaagtacaccgtgcgtgcctttgctgaaaga
accgcaatcaactcaccaatccaaggttcagctgccgatatcatcaagattgccatgatt
aacatgcaaaagaagctggatgaattgcacctcaagaccaagatggtagttcaggtgcac
gacgaattaatttttgacgtgccaaaagatgaacttgaaacaatcaagaagattgtgcca
gaagtaatgcaatcagcagttaagcttgatgtgccactaattgctgattctggttggggc
cacaattggtacgatgcaaagtag
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