Lactobacillus amylovorus 30SC: LAC30SC_08570
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Entry
LAC30SC_08570 CDS
T01436
Name
(GenBank) CMP-binding factor
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lai
Lactobacillus amylovorus 30SC
Brite
KEGG Orthology (KO) [BR:
lai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lai03019
]
LAC30SC_08570
Messenger RNA biogenesis [BR:
lai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LAC30SC_08570
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
MIB_HERC2
Motif
Other DBs
NCBI-ProteinID:
ADZ07815
UniProt:
F0TGH1
LinkDB
All DBs
Position
complement(1660852..1661829)
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AA seq
325 aa
AA seq
DB search
MLKRLLDYNDGEEMDIVVLIKNSQLRRNKKNKLFLAMQFGDGSGEIRGNFWDATNQDAAT
FSTGTIVELNGKREEYQGRPQIRIYSLRVVGPREGYELDQFVKSAPEPINDMHAEINQFV
DQIQNKTWKTIVQYLLKKWGRRFFDYPAGKSNHHAVRGGLAFHTLSMLKDAKGLADNYEQ
INRSLLYAGCILHDMGKVLELTGPAATQYTTEGNLVGHLVLIDEQIMLAAQDLKIDLESE
DLLLLRHMVLSHHGRLEYGSPKLPALLEAEILHRIDDMDAMVYAVTNALQHTGKGTFTEP
LLSQDGRRYYRPKYDPALDHAKHLE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacgactcttagattataatgacggcgaagaaatggatatcgtcgttttgatt
aagaattcgcaattgcgacggaataagaaaaataagctctttttagcaatgcaatttggc
gatggatcaggcgagattcggggcaacttttgggatgcaaccaatcaagatgcggctacc
tttagtacaggtacgattgtagaattgaacggtaaaagagaagaataccaaggccgtcct
caaattcgcatttatagtttaagggtggttggaccacgagaaggctatgagttagatcaa
ttcgttaagtcagctccagaaccgattaatgatatgcatgccgaaattaatcaatttgtt
gatcagattcaaaataaaacttggaagacgattgtccaatatttgttaaaaaagtggggt
agacgcttctttgattatcccgcaggaaagagtaaccaccatgcagtgcgtggtggactt
gcttttcatactttgtcgatgcttaaggatgcgaagggtttagctgataattatgaacag
atcaaccgttcactgctttatgctggatgcatcttgcacgatatgggcaaagtgcttgaa
ctaacaggcccagctgcaacgcaatacactaccgaaggcaatttagttggtcacttggta
cttatcgatgaacaaattatgctagctgcccaagaccttaagattgaccttgaatcagag
gacttgcttttacttagacatatggttttgtcccaccatggccgcttggaatatggttca
cctaagttgccagctcttctggaagcagaaattttgcaccgcatcgatgatatggatgcc
atggtttatgcagtcacgaatgctttgcagcatactggtaaaggaacgtttactgagcca
ctgcttagtcaagatggcagaagatattatcgtccaaaatatgatccagctttagatcat
gccaagcatttggaataa
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