Lactobacillus amylovorus 30SC: LAC30SC_10935
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Entry
LAC30SC_10935 CDS
T01436
Name
(GenBank) very-short-patch-repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
lai
Lactobacillus amylovorus 30SC
Brite
KEGG Orthology (KO) [BR:
lai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lai03400
]
LAC30SC_10935
DNA repair and recombination proteins [BR:
lai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
LAC30SC_10935
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
ADZ08249
UniProt:
F0TJ69
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All DBs
Position
pRKC30SC2:complement(8335..8814)
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AA seq
159 aa
AA seq
DB search
MKYKFDTTPEKSRQMSKVHSKNGKDELVLRKLLWHYGVRYRANYKALPGKPDIAITKYKI
AVFVDGEFWHGYNWKVKRTRIKRNRDYWIKKIERNINRDSAQNQELHNMGWTVLRFWYHD
VTKNPDYVIQTILYYVRCTEEDPEGTKGSFFRSGGGSLV
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataaatttgatacaactcctgagaagagccgacagatgtccaaggttcattcg
aagaatggtaaggatgagttagtgctgaggaagcttttatggcactatggcgtaagatac
agagctaattacaaggctttaccaggcaagcctgatattgcaattactaagtataagatt
gcggttttcgttgatggtgagttttggcatggctataactggaaagttaaacgaacccgg
attaagcggaatagagattattggattaagaaaatagaacgtaatataaatagggattcc
gcacaaaatcaagaacttcataatatggggtggacggttttacgtttttggtatcatgat
gtgactaaaaatcccgactacgtgattcaaacaattttatattatgtccgttgcacggag
gaagaccccgaaggtacgaaaggtagtttttttagatcaggtgggggtagtctagtgtaa
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