Leptospira tipperaryensis: A0128_01445
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Entry
A0128_01445 CDS
T04558
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
laj
Leptospira tipperaryensis
Pathway
laj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0128_01445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laj03019
]
A0128_01445
03009 Ribosome biogenesis [BR:
laj03009
]
A0128_01445
Enzymes [BR:
laj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A0128_01445
Messenger RNA biogenesis [BR:
laj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A0128_01445
Ribosome biogenesis [BR:
laj03009
]
Prokaryotic type
rRNA helicases
A0128_01445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AOP32649
UniProt:
A0A1D7USP0
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All DBs
Position
1:complement(290403..291944)
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AA seq
513 aa
AA seq
DB search
MKKLKFSELNLSTEIQNAIAEMGFEEASPIQSDAIPVILKGKDIIGHAQTGTGKTAAFAI
PTIEMLEVNSKSLQALILCPTRELVIQVSEQFRKLMKYKGNFEVVPIYGGQEIDRQLRAL
RKNPQIVIATPGRMMDHMRRGSLRLDEIKIVVLDEADEMLDMGFRDDMEIILKDTPAERQ
TIMFSATMTDDILNMMKRFQKSPQIIDVTHQKLSAPKIEQIYFEIQESAKGEALARLIEH
RNIKLALVFCNTKAQVDTLVELLKSRGYFAEGLHGDLNQKQRDKVMNGFRNGTVEILVAT
DVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFSFIVGKQIYNLKKIER
ANGVKIEPGKIPTLDDLEETKIHSYTTKIRGLVDGGHLSEYVNQIERLMGTEYTALDIAA
ALFKLTIHKDSGTFDASVKFEAEQRFDDRKPSRKSGGYNRDRSYSGRPSGGGAGGGSRSK
FGGSGGSGRSAGGAGGGDRNKKSGPPPYKAKKK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactcaagtttagcgaactaaacttatccaccgaaatccaaaatgcaattgca
gaaatgggttttgaagaagcctctccgattcaatcggatgcaatcccggtcatcctaaaa
ggaaaagacatcatcggacacgcgcaaactggtaccggtaaaacggccgcatttgcaatt
ccaacgatcgaaatgttggaagtaaattctaaaagcctccaagcattgatcctctgtccg
actagagaacttgtaattcaagtcagtgaacaatttagaaagctgatgaaatacaaagga
aacttcgaagtcgttccgatttatggcggtcaagaaatcgacagacagttaagagctcta
agaaagaatcctcagatcgtaatcgcaacgccgggaagaatgatggatcacatgagacgc
ggttctctacgtctcgacgaaatcaaaattgtagttttagacgaagctgacgaaatgttg
gacatggggtttagagatgatatggaaatcatcctgaaagacactcctgcggaacgtcag
acaatcatgttttccgcaactatgaccgacgacattttgaatatgatgaaacgttttcaa
aaaagtcctcagatcatcgacgttactcatcaaaaactaagcgctccaaaaatcgaacaa
atctattttgaaattcaagaaagcgcaaaaggcgaagccctcgcaagattgatcgaacac
agaaacatcaaactcgctctcgttttttgtaatacaaaagcgcaagtcgacacgttagtc
gaattattaaaatcgcgcggctactttgcggaaggtctccatggagatctcaaccaaaaa
caaagagacaaagtgatgaacggttttcgaaacggaaccgtcgagatcctcgtagcaacc
gacgtggcgggaagaggaatcgacgtaaacaacgtcgaagcggtttttaattacgacctt
ccaagagatggagaagactacgtccatagaatcggaagaacgggaagagccggtaaaaaa
ggaatcgcattctcttttatcgttggaaaacaaatctacaatctcaagaaaatcgaacgt
gcaaacggcgtaaaaatcgaacctggaaaaattccaacgttagacgatcttgaagaaaca
aaaatccattcttatacaaccaagatcagaggtctcgtagacggcggtcacttaagcgaa
tacgtaaatcagatcgaaagattgatgggaaccgaatacacagctcttgatatcgcagct
gcccttttcaaacttacgattcacaaggatagcggaacctttgacgcgagtgttaagttc
gaagccgagcaacgtttcgacgatagaaaaccttcacgtaaatccggcggttacaatcgt
gatcgaagctattccggaagaccgagtggaggtggcgcgggcggaggttcacgttccaag
ttcgggggaagtggcggcagcggaagaagcgccggaggagccggtggcggggatcgaaat
aaaaaatcaggtcctcctccttacaaagcaaagaagaaataa
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