Leptospira tipperaryensis: A0128_03505
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Entry
A0128_03505 CDS
T04558
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
laj
Leptospira tipperaryensis
Pathway
laj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
laj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A0128_03505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laj03400
]
A0128_03505
Enzymes [BR:
laj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A0128_03505
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A0128_03505
DNA repair and recombination proteins [BR:
laj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A0128_03505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_6
NFACT_N
Auto_anti-p27
Cys_rich_KTR
HVO_2718
DZR
Prok-RING_1
DUF7573
DUF7577
Motif
Other DBs
NCBI-ProteinID:
AOP33011
UniProt:
A0A1D7UTV6
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All DBs
Position
1:complement(719232..720062)
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AA seq
276 aa
AA seq
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MPELPDLVIIQERLIPELIDRKIESIEVVDPIVVRDLTGGALETAFKGAVFQKIERHGPF
LNFAFEKMNIVIHPMLSGRFSLDPKYKRKDLCIRFNTDGPVLNYMDDTRMGKVYFLKPEE
LGQIPKYKEQGVDLLSEEFTESLFLKLMDKSRKQTRVFLMDQTKLSALGNAYADEVLFAA
KIHPKTPCNQLAPEDKSLLYKSIKEVLFTSIDYIRKKNAPLEVKVRDHVKVRNRKNEPCP
VCGTTIRRANVLGYDSFFCPNCQQSKGQQFIDWGNV
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactcccggatctagtcatcattcaagaaagactcattcccgagttgatcgat
cgaaaaatcgaatccatcgaggtcgtcgatccgatcgtagtccgcgatcttaccggcgga
gccttggaaaccgcattcaagggtgccgttttccaaaaaatagaaagacacggacccttt
ctcaacttcgcattcgaaaaaatgaatatagtcattcatccgatgttatccggtcgattt
tccctggatccaaaatacaaacgaaaggatctttgtattcggtttaatacggacggtccc
gtcctgaattatatggacgacacgagaatgggaaaggtctattttttgaagccggaagaa
ttgggacaaattccaaaatacaaagagcaaggagtcgatcttctctccgaagaatttacg
gaatcactctttctaaagctgatggacaaaagtcgaaaacagaccagagtctttttgatg
gatcagaccaaactgagtgcattaggaaatgcttatgcggacgaagtccttttcgctgca
aaaattcatccgaaaactccctgcaatcaactcgcaccggaagataaatccctactctac
aaaagtatcaaagaagttcttttcacttcgatcgattatattcgaaagaaaaacgcgcct
ttagaagtgaaagttcgcgaccacgttaaagtcagaaatcgtaaaaacgaaccctgcccc
gtttgtggaactacgattcgaagggcaaacgtcttaggttatgattctttcttttgtcca
aactgccaacaatcaaaaggacaacagtttatcgactggggaaacgtttag
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