Leptospira tipperaryensis: A0128_03580
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Entry
A0128_03580 CDS
T04558
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
laj
Leptospira tipperaryensis
Pathway
laj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0128_03580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laj03019
]
A0128_03580
03400 DNA repair and recombination proteins [BR:
laj03400
]
A0128_03580
Enzymes [BR:
laj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0128_03580
Messenger RNA biogenesis [BR:
laj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A0128_03580
DNA repair and recombination proteins [BR:
laj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A0128_03580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
RQC
Cas3-like_C_2
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
AOP33024
UniProt:
A0A1D7UU11
LinkDB
All DBs
Position
1:complement(737666..739540)
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AA seq
624 aa
AA seq
DB search
MNSEVNKKFKDLESALKEVWGLPQFRKGQKEAIESVLEGNDTLVILPTGGGKSLIYQLPS
VLEEGSLTLVISPLIALMKDQVDSLKAKGITAEYCNSTQDDLEQLRILSRAATGKIQILY
LSPEKALSRQVLEILPKLPLKRIAVDEAHCVSQWGHDFRPEYRKLYELRDKFPKKIPVIA
LTATATQRVIKDISDSLGLKEPSLIKGSFYRENLNFSILFPQNETFRESQLLKILIRGNF
QKSTSGRAIIYCATRQKVESVYDFLKKNGFKVGKYHAGRTGSSREKAQDGYSTGKTNILV
ATNAFGMGLDSPDVRMVIHYQTPASLESYYQEAGRAGRDGKDSDCILFYHPSDLVTQSFI
IGKESNRKGGETLLSYVKDYAVSNQCRQQILCSYFGEAIPECKTCDICLEKESEEELPTS
GRDEFLKREEDKKQKKEQKEKYDFSNEELNTIEELLELIPGKFGKRMIAGVLRGSRSNEI
LRKKLDRTPVYGSLRSVPEEAILRILDEWISEKKVKIVGDKYPKLILTSTVIVRTPRKKK
EESADPERKTLPAKNVVQELKNFRDREARRRKWKKFMVLQNPVIAQIAQAMPETPEELSL
IKGMGSAKVEKFGNDILRILEKWK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaactcagaagtaaataaaaagtttaaagatttagaatcggccctcaaagaagtctgg
gggctcccgcaattccgaaaaggacaaaaggaagcgatcgaatccgttctcgaagggaac
gacacgttagtcatccttcctaccggcggaggaaagtccctcatctatcagctcccttcc
gttttagaggaaggatctcttaccctcgtcatatctcctctgatcgctctcatgaaagat
caagtcgattctcttaaagcaaaggggatcaccgcggaatattgtaattccactcaagac
gatctcgaacagttgagaattctgagccgggccgcaacgggaaaaatccagattctttat
ctatctcccgaaaaagctctgagcagacaagtgctcgaaattctccccaaacttcctctt
aaaagaatcgccgtagacgaagctcattgtgtttctcagtggggtcacgacttcagaccc
gaatacagaaaactctacgaactccgggataaattcccgaagaagattccggtcattgcg
ttaaccgccaccgcgacgcaaagagtcatcaaagacatttccgattccctgggtttaaaa
gaaccttcgcttatcaaaggaagtttttacagagaaaacctaaacttctccattcttttt
cctcaaaacgaaaccttccgcgaaagccaacttttgaaaattctcatccgaggcaatttc
caaaaatcgacaagcggaagagcgatcatctattgcgcgaccagacaaaaggtagaatcg
gtttacgattttctaaagaagaatggattcaaagtaggaaagtatcacgcgggaagaacc
ggctcgagtagagaaaaagcacaggatggttattcgaccggaaagacaaacatactcgtg
gcgactaacgcgttcgggatgggtcttgatagtcccgacgtaagaatggtgattcactat
caaactcctgcgtctctggaaagttattatcaagaagccgggagagcgggaagagacgga
aaggattcggattgtattctcttctatcatccttccgatcttgtcactcaaagttttatc
atcggaaaagaatccaatcgtaaaggaggagagacccttctttcctacgtcaaagattac
gcggtttccaatcagtgcagacaacaaattctttgttcttatttcggagaagcaattccg
gaatgtaagacctgcgatatctgtttagaaaaagaatccgaagaggaacttccgacatcg
ggaagagacgagtttctcaaaagagaagaagataaaaaacagaaaaaagaacaaaaagaa
aaatacgatttttcaaatgaagaattaaatacgatcgaagaattgctcgaactcattccc
ggaaaattcggaaaaagaatgatcgcaggagttttgagaggttcacgttcaaacgaaatt
cttagaaaaaaactagatagaactcccgtttacggatctctccgctccgttccggaggag
gccatcttaagaatcctggacgaatggatttccgaaaaaaaagtaaaaatcgtcggagat
aaatatccaaaactcatcctaacatccaccgtaatcgtaagaactccccgtaagaaaaaa
gaagaaagcgccgacccggagcgcaaaactcttccggcaaaaaacgtcgtacaagaactc
aaaaattttcgagacagagaagctcgaagaagaaagtggaaaaagtttatggttcttcaa
aatccggtcatagcacaaattgctcaggcgatgcccgaaaccccggaagaactttcgctc
atcaagggaatgggttccgcgaaagtcgaaaagttcggaaatgatatcttgagaatatta
gaaaaatggaaataa
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