Leptospira tipperaryensis: A0128_03980
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Entry
A0128_03980 CDS
T04558
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
laj
Leptospira tipperaryensis
Pathway
laj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0128_03980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laj03019
]
A0128_03980
03400 DNA repair and recombination proteins [BR:
laj03400
]
A0128_03980
Enzymes [BR:
laj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0128_03980
Messenger RNA biogenesis [BR:
laj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A0128_03980
DNA repair and recombination proteins [BR:
laj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A0128_03980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOP33091
UniProt:
A0A1D7UU69
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All DBs
Position
1:838333..839784
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AA seq
483 aa
AA seq
DB search
MPSVSELKTFFGISSFRTSQEKIITDVLSGKNCLVIMPTGMGKSICYQLPALAMEGMTIV
ISPLIALMHDQVSKLKTLDIDAGYINSSLSKEDRIKSYENLKRGKYKILYVSPERFRKRA
FLDAIRDRKVSLLAIDEAHCISQWGHDFRPDYTKISEFREILRRPVTIALTATATSEIQK
DIVRQIGLEESEIEVYNEGICRPNLFLDVRTFVDEPSKMDAIVDLLRKQKESTIVYFNLI
KNIEKFSEKLDIQKIPHRIYHGQLAPDQRKRVQNQFLKSDNTVLLATNAFGMGVDKPNIR
TIIHAELPSSLESYYQEIGRAGRDGNASDCHVFYIQDDLTVLMEFIEWQNPDEIFIGRVF
QTMQHLGEKLSSLTYEELQGKVVHRNRGDHRLQTVLNLFERHGVTSGELERNSLRLRGPL
PDALLSPELLDLKKKTSLKRLYQMLLYLKSEKCRREFVYEYFDAVFPGCGNCDVCRLANE
SDR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgccctccgtctccgaactcaaaactttttttgggatttcttcttttagaacttcgcaa
gagaagattatcaccgacgttctttccggaaagaactgtctcgtcatcatgcctacggga
atgggcaaatcgatctgttatcaactgcccgccttggcgatggaaggaatgacgatcgtc
atttctccgctgattgcccttatgcacgatcaggtttcaaaactcaaaaccctggacatc
gacgccggttatatcaattcttctttgtctaaagaggatcggattaagagttatgaaaat
ctaaaaagagggaagtataagattctttatgtttctccggagcgatttcgaaagcgcgcg
tttttggatgcgattcgggatcgaaaggtttctttgctcgcgatcgacgaggcacattgt
atcagtcagtggggtcacgactttcgaccggattatacaaagatttccgagtttcgcgag
attcttcgcagacccgtgacgatcgcgttaaccgccacagcaacctctgagattcagaaa
gacatcgttcgtcagatcggtttggaagaatcggagatcgaagtttacaacgagggaatc
tgcagaccgaatttatttttagacgttcgcacttttgtcgacgagccttctaagatggat
gcgatcgtggatcttctgagaaaacaaaaagaaagcacgatcgtatattttaatctcatc
aaaaatatagaaaagtttagcgagaaactcgatatacaaaaaattcctcatcggatctat
cacggacagttggctccggatcaaagaaaacgtgttcaaaatcaatttctaaagtcggac
aacacggtccttcttgcgaccaatgcatttggaatgggagtggataaaccgaacatacga
acgatcattcacgcggaacttccatcgtccctagaaagttattatcaagagatcggtcga
gcgggaagagacggcaatgcctccgattgtcacgtattttatatccaagacgatcttacc
gtgttgatggaatttatcgaatggcaaaatccggacgagatttttatcggaagagttttt
caaacgatgcaacatttaggagaaaaattgtcttctcttacttacgaagaattacaggga
aaagtcgttcatagaaatcgtggagaccatcgtcttcagaccgtgctcaacctttttgaa
agacacggagtcacctccggagaattggaaagaaattcgctgagactcagagggcctttg
ccggacgcactcctatctccggaactcttggacttaaaaaagaaaacgagtctcaaacgt
ttgtatcagatgcttctttatctcaaatccgaaaagtgtagaagagaatttgtatatgag
tattttgatgcggtctttcccggttgtggaaactgcgacgtttgtcgtttggcgaacgaa
tccgatcgttga
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