Leptospira tipperaryensis: A0128_15835
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Entry
A0128_15835 CDS
T04558
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
laj
Leptospira tipperaryensis
Pathway
laj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
laj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A0128_15835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laj03021
]
A0128_15835
03400 DNA repair and recombination proteins [BR:
laj03400
]
A0128_15835
Enzymes [BR:
laj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A0128_15835
Transcription machinery [BR:
laj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A0128_15835
DNA repair and recombination proteins [BR:
laj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A0128_15835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AOP35182
UniProt:
A0A1D7V024
LinkDB
All DBs
Position
1:complement(3368050..3372270)
Genome browser
AA seq
1406 aa
AA seq
DB search
MRSHNDFESITIRLASPERIKEWSYGEVKKPETINYRTLKPEKDGLFCEKIFGTTKDWEC
YCGKFKSIRYKGVVCDKCGVEVTHSKVRRERMGHIELAAPVSHIWYYRSVPSRMGLLLDM
TVNQLKSVLYFEKYVIIDPADSGRNRGELIDEEEYHAYLDEYGDKFVAGIGADAIKELLA
RIDVDAEARMIRQKIQDKDKISDKRILKRLEVLEAFRDSGNRPEWMVLDIVPVIPPELRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLALKAPEIIVRNEKRMLQEAVDALFDNSR
RKRAVKGKGNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKYHEMGLPKK
MALELFKPFIMKRLVDLDLAPNIKSAKKKVEAEDKEVFDVLEYVVKEHPVMLNRAPTLHR
LGIQAFLPILVEGKAIKLHPLVCHAFNADFDGDQMAIHVPLTPKAQLETWMLMLSPHNIL
NPANGHPICGPTQDIVLGIYYLTSELPPEPGVPLKSFSNLDEVHYAIDRGVVEFRTKISV
YHQGKILETTPGRLIFNTILPEGYAYVNKPLSDKETNKIIADVYDKYGPAKTVLMLDDIK
KLGYRYATLFAPTISIEDIRVSPGKVGLVNDANKEVEKADSEYRKGIITNEERRKKVIEI
WTKTNDLITDSMFKELEKDKGGFNPVFIMAASGARGSKQQIRQLAGMRGLMAKPSGEIIE
LAIRSNFREGLSVLEFFISTHGARKGLADTALKTADAGYLTRRLVDISQDVIISEDDCGT
EESISLGIVKEGENVIVSLNDRVFGRYTAESIIDPVTDQVVYPRNTLITREVGQKIENLG
YDKIRVRSPLTCESKQGVCICCYGMDMARLIPAEIGEAVGTIAAQSIGQPGTQLTMRTFH
IGGAASAKVQEKEHKVSYTAIVNNINGRLLRNDKEQNVFSRRGSIVIQRLIQQYKMEELS
NLRVENGQKVDKGELVATAPSGENITSEMPGTIHIENGVFRILGEEAVVPVKTGTVVNVK
VNDITQPNQPIAEFDPYNEVGISEFDGSIQWMDLEIGKNVRRDEDVKTSNILLKVIEQRR
EKLNPRIAVISGSSREEYSVPVDALISVQDGDKVKAGDILFKIPTVAEKTRDITGGLPRV
DELFEARRPKDATTLAETDGRIEISGEIVKEKRILYIHSDNPDQEKVKVAIPIGKQIRVR
NGDFVKRGDQIDDGNLDPHDILRVKGVTALQVYLVQEVQEVYRLQGVHINDKHIEVVVRQ
MLRKVLITDSGDTSFVNQQQIDRLVFNDENKRVIAEGGSPADSVPILLGLTKASLNTESF
FSAASFQETTKVLTDAAIKGKTDNLMGLKENVIIGHMIPAGTGTKKYKDIAVFKTTYGDL
DRPLEVEEEEEIPQAIAEESDADGDE
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgagatcccataacgacttcgaatcgattacaatccgcctggcttctcccgaaaggatc
aaagaatggtcttacggggaagttaaaaaaccagagaccatcaactaccggaccttaaag
cccgagaaagacggtcttttctgcgagaaaattttcggaaccaccaaagactgggaatgt
tactgcggtaaattcaagtccatccgttacaagggtgtggtttgcgacaagtgcggggtc
gaggtaactcactctaaagttcgtcgcgaaagaatggggcatatcgaactcgcggctccg
gtttctcatatctggtattatcgttccgttccttcgagaatgggacttttgctcgatatg
actgtgaaccagttaaagagcgttctctactttgaaaaatacgtaatcatcgatcctgcg
gattcgggaagaaaccgcggcgaactcatcgacgaagaagaataccacgcgtatctcgac
gagtatggcgacaagttcgtagccggaatcggcgctgatgcgatcaaagaacttctggct
cgtatcgacgtcgacgcggaagcgagaatgatccgtcaaaaaatccaagacaaagataag
atctccgacaagagaattctcaaacgtctggaagttttggaagcgttccgtgattccgga
aaccgccccgagtggatggtactcgacatcgttcccgtcattcctccggaacttcgtcct
atggttcagttggaaggcggtagattcgctacttccgatttgaacgacttataccgtcgt
gtgatcaatcgtaacaaccgtctcaaaagacttctcgctctgaaagctcctgagatcatc
gttcgtaacgaaaagagaatgttgcaagaagccgttgacgctctctttgacaactctcgc
agaaaacgcgccgttaaaggaaagggaaaccgtcctcttaaatccatctccgacatgctc
aaagggaaacaaggtcgtttccgtcagaaccttctcggtaagcgggtagactattccggt
cgttccgtgatcgtagtcggtcccgagctgaaataccacgagatgggtcttccgaagaaa
atggctttggaacttttcaaaccttttatcatgaagagacttgtggatctggacttagct
ccgaacatcaagtccgctaagaagaaagtagaagccgaagacaaagaagttttcgacgta
ttggaatacgtagtaaaagagcaccctgtgatgttgaacagagctccgacccttcaccgt
ctggggatccaagcattcttaccgatccttgtggaagggaaggcgatcaaactccatcct
ctcgtctgtcacgcgttcaacgccgacttcgacggtgaccagatggcgatccacgttcct
ctgactccaaaggctcagttggaaacttggatgttgatgctctctcctcacaatattctc
aaccccgcaaacggacatccgatctgcggaccgactcaggatatcgtattagggatttat
tatttaacttccgaacttccaccggagccgggcgttcctttgaaatctttctcgaacttg
gacgaggttcactacgcgatcgacagaggcgttgtagaatttagaaccaagatcagcgtt
tatcaccaagggaagattctcgagacaactcctggaagattgatcttcaatacgattctt
ccggaaggttatgcttacgtaaacaagccgctttccgacaaggaaacaaacaagatcatc
gccgacgtgtatgacaaatacggtcctgcaaaaaccgtattgatgctcgacgatattaaa
aaattaggatatcgttatgcgactctgtttgctcctaccatttccatcgaagacattcgt
gtgtctccgggtaaggtcggactcgtaaacgacgcgaacaaagaagtcgaaaaagccgac
tccgagtatcgcaaaggtatcatcacaaacgaagaacgtcgtaaaaaggtaatcgagatc
tggacaaaaacaaacgatctcatcaccgattccatgttcaaagaattggaaaaagacaag
ggcggatttaatcccgtgttcatcatggcggcttccggtgcgagaggatcgaaacaacag
attcgtcagctcgcaggaatgcgcggtcttatggcgaaaccttcgggagaaattattgag
ctcgcgattcgttccaacttccgcgaaggtctttcggttcttgaattcttcatctccact
cacggtgcgagaaaaggtctcgcggatacggcgttaaaaaccgccgatgcgggttatctc
actcgtcgtctcgtggatatttctcaggacgttatcatctccgaagacgattgcggaacc
gaagagtctatctctctcggtatcgtaaaagaaggagagaacgtaatcgtttccttgaac
gatcgcgtgttcggacgttacaccgcggaaagtattatcgatcctgtgaccgatcaagtt
gtgtatccgagaaatactctgatcacaagagaagtcggacaaaaaatagaaaacctcggc
tacgataaaatcagagttcgttctccgttgacttgcgaatccaaacaaggtgtttgtatc
tgctgttacggtatggacatggcgagactcattcctgcggaaatcggggaagcggtcgga
accatcgcggctcagtcgatcggacaacctggaactcagttgacgatgagaactttccac
atcggtggtgcggcgtctgcgaaggttcaggaaaaagaacacaaagtatcttatacagcg
attgtgaacaatatcaacggacgtttgctccgtaacgataaggaacaaaacgtattctct
cgtcgtggatccatcgtaattcagagattgattcaacaatacaagatggaagaactttcc
aacttgagagttgaaaacggtcagaaggtggacaagggagagttggttgcaaccgctccg
agcggcgagaacatcacttccgaaatgcctggaacgattcatatcgagaatggagttttc
agaatcttgggagaagaggcggttgttccggttaaaactggaaccgtagtaaacgttaaa
gttaacgatatcactcagccaaatcaaccgatcgcggaatttgacccttataacgaagtc
ggtatttccgaatttgacggaagcatccagtggatggatctcgaaatcggaaagaacgta
agaagagacgaggacgtaaaaacttccaacattcttcttaaggtgattgaacagagaaga
gagaaactcaacccgagaatcgcggttatttccggaagctcgagagaagaatactcggtt
cctgtggacgcgcttatctcggttcaagacggcgataaagtcaaagccggagacattctt
ttcaaaatcccgacggtagccgagaaaactcgagatattaccggcggtcttccaagggta
gacgaacttttcgaagcgagaagacctaaggatgctacgactcttgctgagaccgatgga
agaattgaaatcagcggcgagatcgtaaaagaaaaacggattctttatatccattcggat
aatccggatcaggaaaaagtaaaagttgcgattccgatcggtaaacagattcgggttcgt
aacggagacttcgtgaagagaggggatcagatcgacgacggtaacttagatcctcacgac
attcttcgcgtaaaaggtgttaccgcacttcaagtttatctcgtgcaagaggtccaagaa
gtttacagacttcaaggggttcatatcaacgataaacacatcgaagttgtggttcgccag
atgctcagaaaagttctgattaccgattccggcgatacgagctttgtgaatcagcaacag
atcgatcgccttgttttcaacgatgaaaacaaaagagtgatcgcggaagggggttctcct
gcggactcggttccaattcttctcggacttacaaaagcgtccttgaatacggaatccttc
ttctcagctgcgtctttccaggaaaccacgaaggttcttaccgacgcggcgatcaaagga
aaaaccgataacctgatgggtctcaaagagaacgtcattatcggtcacatgattcctgcg
ggaactggaacgaagaaatataaggatatcgcggtattcaaaactacttacggagatttg
gaccgtcctctggaagtagaagaggaagaagaaattccacaagcaattgcggaagaatct
gacgcggacggagacgagtaa
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integrated database retrieval system
