Lingula anatina: 106150785
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Entry
106150785 CDS
T04921
Name
(RefSeq) collagen alpha-2(XI) chain
KO
K06236
collagen type I alpha
Organism
lak
Lingula anatina
Pathway
lak04512
ECM-receptor interaction
lak04518
Integrin signaling
lak04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106150785
04518 Integrin signaling
106150785
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106150785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lak00536
]
106150785
Glycosaminoglycan binding proteins [BR:
lak00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106150785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
IgGFc_binding
FXa_inhibition
EGF_CA
cEGF
Motif
Other DBs
NCBI-GeneID:
106150785
NCBI-ProteinID:
XP_023932958
UniProt:
A0A2R2MS53
LinkDB
All DBs
Position
Unknown
AA seq
1577 aa
AA seq
DB search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NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgttttggctaggggtgctggtcgtggctgctgtggtcatagatttcacacac
agcgaggctcgctcagcatcacacacagacactagatacaatgacttagatgatctgcca
aggattcgagtgcgaaggcaaggcgacacaggcccaacaggcgctacaggtcctcaagga
cccccaggctcagcaggtgcgcgaggtcctgttggtccttttggacctacgggtccaacc
ggcccccagggtaacccgggccctctgggtcctttcggtccgacaggccccgtgggcccc
ataggacctacaggggttcagggtcctaagggtgacactggccaacgaggaccacaaggc
ccatttggccccactggggctgcagggcagacaggtgccacgggggccattgggccgact
ggagacaaaggcaacaagggcgcaaaggggagtaaaggggccataggcgctgctggattg
acaggaccaacaggtcaacggggcccagtcgggaatgtaggtcctatcgggagccaggga
accaccggtcccaaaggacagaaaggtgaggtaggggcacagggcatcgcaggtccaaaa
ggacagaaaggagaagccggaaaccaaggatcatctggaatcaagggacagaaagggaat
gttggagcagtcggatcagtaggggcaataggaccttttggtccaacgggtccaacgggt
tcaacaggcccggtcggtgcgactggctccataggatttgctggccaaaccggaccaaag
ggacaaaagggtgccgtgggctctcaaggcttcacagggcctgttggtgccaccggagcc
cagggtttctccggaccagcgggccctgtgggttcaaccgggcccactggtgcaaaggga
gaacgcgggtttcaaggcccaagtggtccagtgggtgctacagggccgtctggatttaag
ggtgaaaagggaacaccaggagaagtagggcctactgggtcccaggggaataacggcgtc
actggaccaaagggggccgttggtgccaccggacctcaaggccaaaagggagaattcgga
gccacaggagctgtaggccccgccgggcctgaagggcctaaagggcagaaaggtgcccta
gggcctgttgggccacagggagccttagggccacaaggtccgatcggcgtcgcagggccc
accggggcaactggttcgacgggaccagtaggtccagccgggtcgacaggaccaaaggga
gccgtcggggattcagggcctcaaggtgcggttggggccacaggagcagtgggatcaact
ggaccacagggtcctaaaggagagaaaggagcaataggtttacaaggtccctcgggtcct
caggggagcgcaggtcctcaaggtattaaaggtgttcaaggtttacaaggcctaaatgga
ccgaccggagcgacgggtgccagtggaactaatggagagaagggtcagaagggtgacaga
ggattccagggacttaacggggtagttggcgccaccggaggcacagggggtgttggtcct
gcaggaccggaaggacctaccggaccgctaggagccacaggacccacgggaccccaggga
acagcaggagtgaccggaccccagggtgttcagggtgcggtgggtccccctggggtcacg
ggtccagctggtcaacaaggagataagggtgttaagggtgaccagggcccccaggggatt
caaggtctgcccgggccccagggatccatgggtcccacaggggccaccggcccagcaggt
caagtgggggatagggggccgacaggtgctaccggaccccagggtaatcaggggccaaga
ggtgagacaggggtggcaggaccagcaggaagtaaaggagatctgggaccagtgggacca
acaggagcgacgggggccacgggtccaatgggtgagacaggacctcagggaccaaacggt
accaaaggggaagtaggtctcagaggtatgcaaggcttgcctggactgaccggcctaaca
ggggacacgggacagacaggtgacgtccgaaagggcgacaaaggctccaatggcaccacg
ggagagacaggtgcccctggcccacagggagaggtcggtgctaacggcacggtgggtgcc
accggtgctgtcggccctacaggtccctcgggccagaaaggggagcctggagccaaggga
agtaacggcgccacgggcgtccaaggaagcaaaggagaacggggcagcgccggggtggtg
ggtccgggtggacctacaggctcgactggaccgacaggtcctattggtcctcttggtccc
accggcgccacgggtcctgtaggtcttaatggaagccgaggtgatgtgggaccaatagga
cctactggaccaacgggacaaaagggtgaattgggaccacaagacgtggacgagtgtgct
accaacaatggcggctgccccgggctgtgtatcaacactgcaggctcatacttctgctac
tgtgatgtgggttaccaactgtccactagagacgtccgggtgtatccctcgcgcgtcccc
atcacccagtgtcctgcagatgtacaggcagggaggaagaaacgccaagcagccacacaa
atatcctcaagcggaagggaatttgtcatcatgaacctggagaaccgagtgggtgacgag
aaccaaaaccgtcgtctttacctatacatcctctccgcgtcctccaccagtgttgctgtc
accatacgctggtataacactgctggcgccctgcaggaggtcacgcggaccatcaacgcc
ggtgacgcccatcaggagctactggatagtaacctcgagacccaggggagcaccttggcc
acgaaagctgtccggttgtctgccaatggcgatattattgtttggtcgtacaacaaaaac
gcccactccgtggacggatacctagctttacccattgaagctctggggacgaactactac
acggtgtcctactccccgccaaagttccagacagagtttggcgtggcggcagtggaggac
ggcaccacggtaacgatcacgttgcctgccacggcatctggcgccaatgcggtctcggtg
acctacaacggcttcacgtactccagtgggtcccagatcgtcgtgaccctgaaccagtac
caggctctccagctccagtccacttccggctccttctcagacctcacaggaacgcgcgtc
caagccaacaagaacatcgctgtgttcagtggcaacgtgaggaccaacgtgcaaggtctg
gtttccgccacacctcagagagaccactgtgtggagcagatacccccagtgaccctctgg
ggcagggatttcgccacggtgcccataccacagagaacgaccggggacctgtttagggtc
gtagcgtccgaggccaatacccagttcacgcgcactaacggcgccggaaccgtcacgtcc
tacaccatctctgctgctggcggtcaccttgaccttgacctgcccagtgatgactaccaa
aggatcgttgccaataaaccgattctggtccagcagtttgttaaaagttaccttaaccct
agcgaacctggcgacccttcaatggtgtctgttatccctactactgcttactcaaacaat
tataggtttacactaccagccttgggggactacacgtggactcatttcatgatgatagtc
attgaagaccagtacaagaacactctgtctctggatggcacacagttatctggggtcacg
tggaacaatattaataacagtcccgtgtcctcagacctcacaaaccttgtcggaggcttc
gtggcgatttctaccgaagcgacggtgagagtgttgagcagttccaacgcccaggctagg
atgatgattatgttatatggtagagcacccgggcagtcgtacgctgtcccgctaggggtc
tcatttcaagaggctccatcaaacgtggacgcacaagtttgtaacacagacgccgcaggc
acgtgctgcacctgccatattggcgggaatcagtatgcaccctaccagggggcagcacag
gctgactgctgtgttcaggaaaatgtaagatgcagataccctaccaccaacgtgaagttg
tgtgagtgtgacgtcaacggcgtcgtaattcagttgaacagtacaaactgtgaaaacaag
gacgagtgtgccgtgaacaacggtggctgtcaacacgtatgtacagacacgacctttgga
cagggtcttaatgggggcggctacacgtgcagctgttatactggctaccaactagcactg
gacgctcacgagtgcatagatataaatgaatgtaacgcaggtcgctgtaccagctccgag
gtctgtgtgaacacagtgggctcatattattgtgttcgatctgatagcatgggagcaagt
ggacttgtggccccagaaatcgtccagaaaaccccggcctacctgacggcggcagtcact
gggaacaccatctggtcgtcagtgttaactgtggtagtggtgctcgtgattgcggtgggg
ttcagaagatggcggaaggcacagtgtcaacctgacagcgtgaaatcagagaactggtct
ctgtactcggagagaattgacgtcgagcaagtagctcatgccgcggccgcctctagtcgt
gtgaacccagtattcgcggaaacacaacatgaggaggaaaatacagccttgtag
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