Lingula anatina: 106150882
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Entry
106150882 CDS
T04921
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
lak
Lingula anatina
Pathway
lak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106150882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106150882
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106150882
mRNA degradation factors
5'-3' decay
Decapping complex
106150882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_Prp19
PIN_8
Sey1_3HB
Beta-prop_EML_2
Beta-prop_TEP1_2nd
DUF5505
YpjP
BSP_II
Motif
Other DBs
NCBI-GeneID:
106150882
NCBI-ProteinID:
XP_013379352
UniProt:
A0A1S3H095
LinkDB
All DBs
Position
Unknown
AA seq
1330 aa
AA seq
DB search
METSSGSSSFNTTEASQLLKDILQGNTGVSSISSSVTDGDFARSARDISGESGASFADAV
KAHLPKQQIILQGNDSANSFSVYGRDVSIIASQASGAAERVPASNKVKITPMVNFEWEPK
YYIGNLVAIHRDGIHMSYVLTGTGKSGGCVRVINRKTAERALLKGFTGRVMDVAFAHHTL
VIIAAVDEMGNLFVHQADDTDDGKILTACLLHVVRPAETPPSSYHRVIWCPYIPDEEEEQ
GTEDMPTHDAGKLLVVTHDEKAELWSVDMVNGEYGTGPHRAEDIDIGFLAIENHTRPIVD
AAFSPDGTALATASLDGQVKFFQVYMQDKATPRCLHEWKPHDGLPLSSLFFLDDHKNPKP
EVQFWKFALTGANDNRELKIWSCESWTCLQTLRFVSPPDLPSNFQVEPSLKACLDLSANY
MVLADTKRKVLNVLQLYQDAEHGTAHVSSVSEFLLTQPCLSMAILEAGSKVVKKSSTQEQ
SGEMNSGNLDEDEDDEDQEARDEDGIKGCLVRLYTVQHRALQELQIHFELQTSVPNLPAP
SISSISQDGTALRDALTDISMDTVTSLSDVEYKAKDAAGNNSQPLLLTPDAFTSSPRKSS
ESLHSSNTSSSFTHVSALNEEHGASVMSPSSSVTLTPNSSHVPTPTTLPLPPVTPGEENR
LTTTPKHTPQHTPKLNLSAAEQDLDDFLGSPTSTSSSIKGNQPPSFQNGGIKVGDRGGGQ
GDMLDELFGSQGTKRQHLQSSSSSTTSIEVGQIMDAKPSYVVGETAQEEEEEEEEEEGEE
EEEEEEQHSYGMRVWPQAPKVTDEGQEKGDGTEDQDEDVKIEEETEEHTGRTDSSSEREE
ISSSSESPKKKSHRHPSTRQRTSSYSPTSARSLEAGSIPQLQDTMQNIMSLLQDQRQELA
SLKAQLHQQREHNALMEGVLGNRLETALEQYGHSQDLRLREALSSTHSARQHDSHQVVNT
LSEALVNKVIASLDTAVKTEIKNSVVPTIQRMIHPLQEHLHREMAQKLTATDSVMKDNIG
KMVRSKQTVEAIGQAAGQAVSGTVISAYRETFQNTILPGFERSCQHMTGQLNEAFHKGTQ
EYVQQLQSQMDSVNQRQNETKDYVRSQLQAAMEQFKSSTQSVQQRLVTSVQTEVNKHLQQ
TMSGLEEAMITRLKSTIRDEVSDALRDQQERLNESIAQAMRSTAATPVPGFVDPQQQQAA
IHHLLKQGQLNNAFQQALSASDLSLVMYVCETVNPSQVFNQTPCPLQQPVLLSLIQQLSA
DLGNNTELKHKYLEEAVMNLEPTNSLTREHMPAVLNNLVQKLLEYINANPTDRMTRQLRM
LLMASQSLLK
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggaaacctccagtggaagttcgtccttcaacacgaccgaggccagccagcttttgaag
gacatattgcaaggaaacacaggtgtttccagcatatcaagttctgtcactgatggagat
tttgccaggtctgcaagggatatcagtggagagtcaggtgccagttttgcagatgcggtg
aaggcacacctgccaaaacagcagataattttacaaggaaatgacagtgccaatagtttt
agtgtatatgggagagatgttagtatcattgccagtcaggccagtggtgccgctgagaga
gttccagccagtaataaggtgaaaatcaccccaatggtaaattttgaatgggagcccaaa
tactacattgggaacttggttgctatacacagggatgggatacacatgtcatatgttctg
acagggacaggcaaatctggtggctgtgttcgggtgatcaacagaaagactgcagaacga
gcacttttaaagggttttaccggacgtgtgatggacgtagcattcgcacatcacacactc
gtgatcattgcggcagtagacgagatgggtaatttgtttgtccaccaggctgatgacaca
gatgatggtaaaatactcactgcctgtctcctgcatgtggtgcgtcctgcagagacgcca
cctagtagctaccacagagtcatctggtgtccatacatccctgatgaggaggaggaacag
ggcactgaggacatgccaacccatgacgcaggcaaactgctggtggtgacccatgatgag
aaggctgagttatggagtgtagacatggtcaatggagagtatggtactggaccacacagg
gctgaggacatagatataggctttctggccattgagaaccacactcggcccatagtggat
gctgcattttccccggatggcactgccctggccactgccagtcttgatggacaggtcaag
ttctttcaagtttacatgcaagacaaggcaacaccaaggtgcctacatgagtggaaacca
catgatgggctgcctctgtctagtttgttcttcttggatgaccacaagaaccccaaacca
gaggtgcagttttggaagtttgcactgactggagcaaatgacaaccgagaactgaaaatc
tggagctgtgagtcctggacctgtctgcagacactaagatttgtgtccccaccagacctg
ccctccaacttccaagtggagccatctttgaaggcatgtctggatctcagtgctaactac
atggtactggcagataccaaaagaaaggtattgaatgttctccagctgtaccaagatgca
gagcatggtacggctcatgtcagctctgtctctgagtttctgctcacccagccttgcctc
agtatggccatactagaggctggcagcaaggtggtgaagaagtctagcacacaagaacaa
agtggagaaatgaactctggtaatctagatgaggatgaggatgacgaggatcaagaggcc
agagatgaggatggcatcaagggatgtctagtgagattatatacagtgcaacacagggct
ttacaagaactacaaattcactttgagttgcagacgtctgtgcccaaccttccagcgcca
tctattagctcaatttcccaggatgggacagccttgcgtgatgctctcacagacataagt
atggatactgtgacatcattatcagatgtggagtataaagccaaagatgctgctggcaac
aactcccagcctttgcttctcacacccgatgccttcacatctagtcctaggaaatccagt
gagagccttcacagtagtaacaccagcagcagttttacacacgtgtcagcccttaacgag
gaacacggggcctcagttatgtccccctccagcagtgtgacattgactccaaattccagt
catgtccccacccctacgaccctccctctccctcctgtcaccccaggggaagagaaccgc
ctgaccaccacccccaaacacaccccccagcatacgccaaagcttaacttgagtgcagct
gaacaagacctggatgacttcctgggttcacctacatcaacatcctcgtctatcaaagga
aaccaaccgccatcttttcaaaatggcggcatcaaggttggcgatagaggtggaggtcag
ggcgacatgctggacgaactatttgggagtcagggcactaagaggcaacacctacagagc
agcagctcaagtacgaccagcattgaggttggccagatcatggatgccaagccaagttat
gtggttggagagacggcacaggaggaggaagaagaggaagaggaggaggagggagaagaa
gaggaggaagaggaagaacaacatagttatgggatgagggtgtggccacaggctcctaaa
gtgacagatgagggtcaagaaaagggtgatggaactgaagaccaagatgaagatgtgaag
atagaagaagagactgaagagcatactggcaggacagattccagcagcgaacgtgaagaa
atatcatcctcatcagaaagtcccaagaagaaatctcacagacatcccagcaccagacaa
cggacatccagttactctcccactagtgcaaggtctctggaggctggctctatacctcag
cttcaagataccatgcagaacatcatgagtctgttacaagaccagagacaggagctggcc
agtcttaaggcacagcttcaccagcagagggagcacaatgcactgatggagggggtgctt
ggaaaccgcctggagaccgcactggaacagtatggtcactcacaggatttgagattaagg
gaggcattaagtagcactcactccgccagacaacatgacagccaccaggtggtcaacaca
ttgtccgaggctctggtcaataaggttattgccagtctggacacagcagtcaagacagag
atcaaaaattctgtagtgccaactatccaaagaatgattcacccattacaagagcacctt
cacagggagatggctcagaaactcactgcaacagactctgtgatgaaagataatattggc
aagatggtcaggtcaaagcaaacggtagaagctatagggcaggcagcaggacaggcagtg
tcaggcacagtgatctcagcatatagggaaacgtttcagaacaccatattgccagggttt
gaacgttcttgtcagcacatgacaggacagttgaatgaagcttttcataaaggaacgcaa
gaatatgtccagcagcttcagtcccagatggactcggtcaatcagcgccaaaatgagaca
aaggactacgtccgcagtcagctccaggcggccatggaacagttcaagtccagtacccag
agtgtccagcagagactggtgaccagtgtccagactgaggtgaacaagcacctgcagcag
actatgtcaggtttggaggaggccatgatcacacgcctcaaatcaactatccgagatgag
gtctcagacgccttacgtgatcaacaagagcgattaaatgagagcatcgcacaagccatg
cgctctacagcagctacccctgtgcctggttttgtggaccctcagcaacagcaagcagca
attcaccacttactgaagcaggggcagttaaataatgcttttcagcaggccttatcagca
tctgatctgagtcttgtgatgtatgtctgtgagacggtgaacccgtcacaggtcttcaac
cagacgccatgtccactccagcagccagtcctcctctctctcatacagcagctgtctgca
gacttgggcaataacacagaactcaaacacaaatacttagaagaggcagtgatgaacctg
gagcctactaattctctgaccagggaacatatgccagcagtcctgaacaatctggtgcaa
aaactccttgaatatataaatgcgaaccccacagataggatgactcggcaacttagaatg
ttgttaatggcctcacagtctttactgaaatga
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integrated database retrieval system
