Lingula anatina: 106151627
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Entry
106151627 CDS
T04921
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
lak
Lingula anatina
Pathway
lak03430
Mismatch repair
lak03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106151627
03460 Fanconi anemia pathway
106151627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lak03400
]
106151627
DNA repair and recombination proteins [BR:
lak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
106151627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
ExsD
Motif
Other DBs
NCBI-GeneID:
106151627
NCBI-ProteinID:
XP_013380444
UniProt:
A0A1S3H5N3
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MAAGIQAIDKKSVHRICSGQVVLNLATAVKELVENSIDAGASIIEVRLREYGSDLVEVVD
NGLGVEESNFEGLTLKHHTSKLQDFADLVSVETFGFRGEALSSLCALSKLTITTCHVDGK
VGTKLEYDHNGKLINQTPCARQQGTTVCLSQLFSTLPVRYKEFQRNLKKEFSKMVQVLNS
YCIVATGVRISCTNVTEKGKKSTVISTNGNPGMRENITNVFGAKQLNTLMDFTQCQPEDD
TAEEYGLKSTNKNGLLKITGFISKCDHGLGRSSTDRQFFFINKRPCDLTKLSKVINEVYH
MYNRHQYPFVALNVSLEKGEHTMDMFPEMEVLGQFNLGFIIGKLGPDLFIIDQHATDEKY
NFENLQKHTVIQSQKLIHCTNSACQVGLHACKQELDIWQGRMDMFPEMEVLGQFNLGFII
GKLGPDLFIIDQHATDEKYNFENLQKHTVIQSQKLIHPQTLELTAANETILVDNLEVFRK
NGFDFQINEDAVPTQRVKLVSMPVSRNWTFGKEDIEELIFMLTDSPGVMCRPTRVRQMFA
SRACRSSIMVGTALDKAEMKKLLCHMGELDQPWNCPHGRPTIRHLINLHMLPD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaggcatccaggctattgataagaagtctgtgcatcgtatatgttcaggacag
gtggtgctgaacttagctactgctgtgaaagaacttgtggagaacagtattgatgctggt
gcttcaattatagaggtgcgtctcagggaatatggcagtgacctggtggaggtggtggac
aatgggcttggggtggaggagagcaactttgagggactcacattaaaacatcacacctcc
aagctgcaggactttgctgacctggttagtgtggagacgtttggtttccgcggagaggct
ctgagctctctctgtgctcttagcaaattaaccataactacatgccatgttgatggcaaa
gtggggacaaaattagagtatgatcacaatggaaagctgattaaccaaacaccatgtgcc
cggcagcaaggcaccacagtttgtctttcccagttgttctccacactgccagtcagatac
aaggagttccagaggaatctgaaaaaggagttcagcaagatggtgcaggtgttaaatagt
tattgcattgtggcaactggtgtccggatctcttgtaccaatgtcactgaaaaagggaag
aaaagtacagtcatcagcacaaatggaaacccaggaatgagagaaaatatcacaaatgtg
tttggggccaagcagttgaacactttgatggacttcacccagtgccagcctgaagatgac
actgcagaggaatatggtttgaaaagtacaaataagaatggtttgttgaaaattacaggg
ttcatctctaaatgtgatcatggtcttggcaggagtagcaccgacagacagttctttttc
atcaataaaagaccttgtgatctcactaaattatctaaagtgatcaatgaagtctaccac
atgtacaacagacaccagtacccctttgtggccttgaatgtgtctcttgaaaagggtgag
cacacaatggatatgtttcctgaaatggaagtgttagggcagtttaacctaggatttatc
ataggtaaactagggcctgatcttttcatcattgatcaacatgcaactgatgagaagtat
aattttgaaaacctgcaaaagcatacagtgatacagagccagaaattgatacactgtacc
aactcagcgtgtcaagttggtctccatgcctgtaagcaggaactggacatttggcaagga
agaatggatatgtttcctgaaatggaagtgttagggcagtttaacctaggatttatcata
ggtaaactagggcctgatctttttatcattgatcaacatgcaactgatgagaagtataat
tttgaaaacctgcaaaagcatacagtgatacagagccagaaattgatacatccacaaaca
ctggaattgactgcagccaatgaaactatactagtggacaatctagaagtcttccggaag
aacggatttgactttcaaataaatgaagatgctgtaccaactcagcgtgtcaagttggtc
tccatgcctgtaagcaggaactggacttttggcaaggaagatatagaagaactgatattc
atgctgacagattcaccaggtgtcatgtgccgtcccaccagagtgcgccagatgtttgcc
tcaagagcatgtagaagttccataatggtaggaacagctcttgataaagcagaaatgaaa
aagcttctctgtcacatgggggaactggatcagccatggaactgcccacatggtcgacca
accattcgccatcttatcaacctacacatgttgccagactag
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