KEGG   Lingula anatina: 106151846
Entry
106151846         CDS       T04921                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
lak  Lingula anatina
Pathway
lak03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lak00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106151846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lak03019]
    106151846
   03041 Spliceosome [BR:lak03041]
    106151846
Messenger RNA biogenesis [BR:lak03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     106151846
Spliceosome [BR:lak03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106151846
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_Prp19 WDR55 Beta-prop_EML_2 Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 PQQ_2 Beta-prop_SPT8 WDR54 Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 106151846
NCBI-ProteinID: XP_013380726
UniProt: A0A1S3H5I8
LinkDB
Position
Unknown
AA seq 345 aa
MAGTLQFRDHDGAQEAIRKQLHTTIFSQAFSPGGKYLAVGTSFGEIAVFNISASLSRNSN
EEDMKPTFLFKATDGPIYCLTTTDKFLISAGTGDVIAWNWVDVLRKTPKVAWSLPIPTNR
YGLSNPEVNSLAIESKDGGKRLFAGCGDNNTYIWDLESGSLVQTLAGHTDYVHSVALKSL
SDQCVTGSEDGTVRLWDLRTPQEPVAVIEPYSEVTCARSEYGRWIGCVAVDPTDDWLVCG
GGPKLSLWHLRTFAVTTVFDTPGACQQYTSFFEDTIISAGSEPYVNHWYINGDRRSRVPC
TPTSVCNVTINSEAENNKVLSVVGSSAKVDLCTNFGYKALSLTVC
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggcgggtactttgcagtttcgagaccacgatggtgcccaggaagccattaggaagcag
ctccacaccacaatcttcagccaagctttttctcctggtggcaagtacctggctgtaggc
actagttttggtgaaatagcagttttcaacatatcagctagcttaagcaggaacagcaat
gaagaagacatgaaacctacttttttatttaaagcaactgatggccctatatactgttta
actacaacagacaaatttcttataagtgctggaacaggtgatgttatagcctggaactgg
gtagatgtattgaggaagactcccaaagtggcctggtctttgcccatccccactaacagg
tatggtctaagcaacccagaggtcaattcactggccattgagtccaaggatggtggcaaa
aggctgtttgctggatgtggggacaacaacacgtacatatgggacttggagtctgggagt
ttagttcaaacactagctggccacacagactatgtccatagtgtagccctgaagagcctg
agtgaccagtgtgtgactggctctgaagatggcacagtgaggctgtgggacctgcggact
ccacaagaaccagttgcagtaattgaaccttattctgaagtgacatgtgccaggtcagag
tatgggcgctggataggttgtgtagctgtggaccccacagatgattggttggtgtgtgga
gggggccccaagttgtccctgtggcacctgcggacatttgcagtcaccacagtatttgac
acaccgggggcttgccagcaatatacaagtttttttgaggacactattatatctgctgga
tctgagccatatgtaaaccactggtacatcaatggagacaggagatccagggtgccttgt
actcccaccagtgtctgcaatgtaaccatcaatagtgaggcagagaataacaaggttctc
agcgtggttggtagcagtgctaaagtggacttgtgtacaaactttggatataaagcctta
tcattaacagtctgctaa

DBGET integrated database retrieval system