Lingula anatina: 106152534
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Entry
106152534 CDS
T04921
Name
(RefSeq) fibril-forming collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
lak
Lingula anatina
Pathway
lak04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106152534
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lak00536
]
106152534
Glycosaminoglycan binding proteins [BR:
lak00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106152534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
SRCR
SRCR_2
Motif
Other DBs
NCBI-GeneID:
106152534
NCBI-ProteinID:
XP_013381599
UniProt:
A0A1S3H900
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MKIIGSKFEFFILLVIIHFVQSQPTTEYEVMHSERDDFVEGADHRWNLLLAQEREAFSEA
EILGIKRTLHEFQEEKKILEERISKLEATNNELQLTVSRINETSLPPIQGPPGPPGNTGL
PGIPGTKGPKGDRGPRGEPGPHGNPGETGPQGSPGVRGAPGLPGSPGLNGSKGSGGERGA
PGSPGHPGPKGSPGKPGPKGNRGDTGGEGPPGGTGPGGPRGEAGSPGLKGDKGENGGQGI
KGQRGLPGLTGLPGAQGVKGDAGSRGPTGFPGVHGPKGSKGDTGDIGLPGKKGEPGIRGT
RGQKGERGIPGPAGPQGNQGDKGMKGVKGAMGPQGPKGQTGRSGTMSKGIKGEAGPPGRR
GMKGETGPIGPNGIPGRPGPAGAKGSKGVKGQQGSAGLKGERGVAGAPGQAGSTGARGPK
GQKGQNGSPGPRGLKGTPGIQGPRGPQGPQGSQGPKGAPGARGPKGETGAKGSLGHRGPS
GPKGLPGAVGSKGSPGPRGLSGAAGLKGAKGASGPRGLKGANGSKGNQGPRGMPGPKGVK
GSAGARGSTGAKGQKGQPGARGLQGLRGSPGPRGPAGPTGATGPKGLKGERGSGSTRVVR
LVGGRASYQGRVEIYHNGRWGSVCDDNFSAVDAKVVCRELGLPYGRVTVQNSAHYGSSSG
PIWLDDVNCRGTESVKREIANESISFEQRMQQLEARIKALELEVSRFTETAQLPVRSPPG
FPGSSEIPRIPGTNGIPGPPGNGEKGNPGWLGPEGEIEMIGGRSIMESAGLTGELDGCGC
KGEKGEVGAPGIRGPVGSIGFPGPRGLPGLRGPPGPPGPPGADCVHEDSYTIHDVAPRYS
PTEQSENPKQEWRLRLVNGRTPYRGRVEILVDGQWGTVCDNNFNINAARVVCKQLNLPHS
SPAVQVGAHYGAGEGPVWIQNVSCNGTEARLDLCRHSVRGSVSCSHQRDVGVTYL
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatcggttcaaaatttgaatttttcattttattagttattatccactttgtt
caaagtcagccaacgacggaatatgaggtaatgcattctgaaagagacgatttcgtggaa
ggagcagatcatcgatggaatctcctacttgcccaggaaagagaagcgttttctgaagct
gaaattctgggaatcaaaagaactcttcatgaattccaagaagagaaaaaaatcctagaa
gagagaataagtaaactggaggccacaaacaatgagttgcaattaacggtttctcgcata
aacgagacgtcactaccgcccattcaaggtcctcccggtcctccaggcaatacaggtctc
cctggtataccaggtacaaaaggtccaaagggggacagagggccccgaggagaacctggc
cctcatggtaaccctggagagacggggccccaggggtcaccgggtgtgcgaggggcccct
ggacttccaggttctcctggattgaacggatccaagggttccggaggggaacgtggtgcc
ccgggttcaccaggacatcctggtccgaagggaagccccgggaagccaggaccaaagggt
aaccgcggagatacgggtggtgaggggccaccgggtggcactgggccgggtggaccccgt
ggagaagccggtagtcctggactaaaaggtgataagggagagaacggtggtcaaggaata
aaagggcagcgagggttacctggattaactggcctgccaggagcacagggtgtaaaagga
gacgccggatcgagaggaccgacaggttttccaggtgtacatggtccaaaaggatcaaaa
ggagacactggagatattggattgccggggaaaaagggtgaacctggcattagaggaact
aggggacagaaaggggaacgaggtatcccaggccccgcaggtccacaaggtaaccaaggt
gacaaaggaatgaagggggtcaaaggagccatgggtccgcaaggccccaaaggacaaact
gggaggtcaggcaccatgagcaagggcatcaaaggagaggctggacctcctggtagacgg
ggaatgaaaggcgaaacgggcccaatcggaccaaacggaatcccagggcgcccaggacct
gcaggtgccaaaggatcaaagggcgttaaagggcagcaagggtcagcaggactaaagggt
gaacgcggagttgcaggcgctccaggccaggcagggtctacgggtgccagaggaccaaaa
ggtcagaaaggtcaaaacggttctcctggtccacgtggtttgaaagggacacctggaata
cagggccctagaggaccacaaggtccacagggttcacagggaccaaaaggggcgcccgga
gcgagaggacccaaaggtgaaacgggtgcgaaaggaagtcttggacaccgtggcccttcc
ggaccaaaaggcctcccaggtgcagtagggtcgaaagggagcccaggccctcgtgggctg
tcaggagcagcagggctaaaaggagcaaaaggggcctccggtccaagaggtttgaaaggg
gcaaatggttcgaaggggaatcaaggaccacgtggaatgcctggtcctaaaggagttaag
ggttccgcaggagccaggggcagtaccggggcaaaaggacagaaaggtcagcctggtgct
cgtggtcttcaaggattgcgtgggtcaccggggcctcggggacctgctggtcctacaggg
gcaactggaccaaaaggtctcaaaggagagcgtggatcagggtcgactcgagttgtccgt
ctggtcggtggcagagcatcctaccagggtcgagttgaaatctaccacaacggccgatgg
gggagcgtgtgtgacgataactttagtgccgtagacgccaaagtggtctgtagggaacta
ggcctcccttacggcagagtgacagttcagaactctgcgcactacggaagcagcagcgga
ccaatttggctggatgacgtcaactgcagaggcacggagtccgtcaaaagagagatcgcc
aacgagagtatttcattcgagcaacgaatgcagcagctggaggcaagaattaaagccttg
gaattagaggtttctcggtttactgagactgcacagttaccagtaagaagtcctccgggc
tttccgggatcatcggagatccctaggattcctggcactaatggcattcctggcccgccc
ggaaacggagaaaagggcaaccctggatggctaggtccggaaggggaaatagagatgata
ggagggagaagcataatggagtcggctggactcaccggagaactcgacggatgtggatgt
aagggcgaaaaaggagaggtgggggctccaggcattcgaggtccagtaggctccattgga
tttcctggtccccgaggtttacctggccttagaggtccacctggtccccctggtcccccg
ggcgccgactgcgttcatgaagatagctacactatacacgatgtagcacctcgctatagc
ccaacagagcaatcagaaaatcccaagcaggaatggcgtctccgtttggtaaatggaaga
acgccataccgggggcgtgttgaaatcttagtggatggccagtggggtaccgtgtgcgat
aataactttaatatcaatgccgccagggtagtttgcaagcagctcaacctccctcattct
agcccagctgtccaagttggtgcccactatggtgcgggcgaggggcctgtttggatacaa
aatgtctcctgcaacggcacagaggccagattggatctgtgccgacacagtgtgcgtggt
agtgtctcctgctcccaccagagggacgtgggggttacctacttgtaa
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