KEGG T04921: 106154802

Lingula anatina: 106154802

Entry

106154802         CDS       T04921

Name

(RefSeq) cleavage and polyadenylation specificity factor subunit 4

K14404

cleavage and polyadenylation specificity factor subunit 4

Organism

lak Lingula anatina

Pathway

lak03015

mRNA surveillance pathway

Brite

KEGG Orthology (KO) [BR:lak00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106154802
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lak03021]
    106154802
   03019 Messenger RNA biogenesis [BR:lak03019]
    106154802
Transcription machinery [BR:lak03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     106154802
Messenger RNA biogenesis [BR:lak03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     106154802

SSDB

Motif

Pfam:

zf-CCCH zf_CCCH_4 zf-CCHC Torus zf-CCCH_2 zf-CCCH_3 zf-CCCH_4 zf-CCHC_3 zf-CCHC_2 Nab2-like_zf-CCCH_

Other DBs

NCBI-GeneID:

106154802

NCBI-ProteinID:

XP_013384749

UniProt:

A0A1S3IG21

LinkDB

Position

Unknown

AA seq 294 aa
MQEIVANVYNVKFDIEIALEQQLGAHPLPFPGMDKSGSSICMFYLRNVCNKGTACPFRHV
RGDRSVVCKHWLRGLCKKGDDCEFLHEYDMSKMPECFFFSKFGACSNKECPFLHIDPDAK
IKDCAWYDRGFCRHGPNCKNRHVRRVLCRNYLTGFCLDGPKCQYVHPSFEIPQADPALQA
KKASITCHNCGEAGHKAVNCPHLSESMKSEFFRGNQQPSGGGDTGQGPQQLQQQQQHMQN
QQQQQQGNPRFVHPHNPMQRRPLDQVTCFKCGEKGHYANKCPKGHLAFLSSSKP

NT seq 885 nt +upstreamnt +downstreamnt
atgcaggaaattgtagcaaacgtttataatgtcaaatttgacattgagattgccctagaa
cagcaactaggagcacaccctcttccattccctggaatggataaatctgggtcaagtatt
tgtatgttctatttgaggaatgtatgtaataaaggaacagcttgcccattccgtcacgtt
agaggggacagatcagttgtctgtaaacattggcttagaggactgtgcaagaaaggagat
gactgtgaatttcttcatgaatatgatatgtcaaaaatgccggaatgctttttcttttcc
aaatttggtgcttgtagcaacaaagaatgtccattcctacacatcgacccagatgccaag
atcaaagattgtgcatggtatgacaggggattctgcagacatggtccaaactgtaaaaat
aggcatgtgagaagagttctttgtaggaattaccttactggattctgtttggatggaccc
aaatgccaatatgttcatcccagttttgaaataccacaggcagacccggcactgcaggct
aaaaaagccagcataacatgtcacaattgtggagaagcagggcacaaggctgtgaattgt
cctcacctgtcagaaagtatgaagtctgagttctttaggggaaatcagcaaccaagtggc
ggaggagatactggtcaaggtcctcaacagttacaacaacaacaacaacatatgcagaat
caacaacaacagcagcaaggaaatcccaggtttgtgcatcctcataacccaatgcagagg
agaccactggatcaggttacatgttttaagtgtggagagaagggtcattatgcaaataaa
tgccccaaaggtcatctagcattcttgagttcaagtaagccgtga

DBGET integrated database retrieval system