Lingula anatina: 106155572
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Entry
106155572 CDS
T04921
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
lak
Lingula anatina
Pathway
lak03022
Basal transcription factors
lak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106155572
09124 Replication and repair
03420 Nucleotide excision repair
106155572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lak03021
]
106155572
03400 DNA repair and recombination proteins [BR:
lak03400
]
106155572
Transcription machinery [BR:
lak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106155572
DNA repair and recombination proteins [BR:
lak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106155572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
106155572
NCBI-ProteinID:
XP_013385920
UniProt:
A0A1S3HIG4
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MADDEVDQGYTWENEYERTWEALQEDDEGSLRTAVDGIIHKGKRKRLLEKKANIRLGMMR
LLQLVVQYSEAVSPLXSSSFFLXLLESFIEEYFDQNPISQLGVIDTRNKRAEKVTELGGN
PRKHIQLIQKLAVKPCQGEPSLQNSLELAMQTLRHMPGHASREILIIYGSLTTCDPGDIY
ETVKSLKELNIRCSIIGLAAEVQICKKICQETKGSYHVILDETHFRDLLTYHVTPPPARN
NAESSLIRMGEPHYQFLLEIKSQYPSLCICHLDSQTFQGFRSGGYFCPQCKSKYCELPVE
CKACGLTLVSAPHLARSYHHLFPLESYKEVQDKSSVLQSHCFSCQTEFTEHPVYVCGRCQ
RGFCIDCDVFIHEALHSCPGCSGSRHTQERQISGTLLAGLTGK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgaagtagaccaaggatacacgtgggaaaacgaatatgagagaacttgg
gaagctctgcaagaggatgatgaagggtcccttcgcacagctgtggatggcatcattcac
aaaggaaagagaaaacggctgctggagaagaaggcaaacatcagattgggtatgatgcgc
ttgctccagctggtggtacaatattcggaggcggtatcgcctctctgatcctctagtttt
tttctgtagttgctggagagcttcatagaggagtactttgatcagaaccccatcagtcaa
ctgggggtgatagacaccagaaacaagagagcagaaaaagtgaccgagctcggaggcaat
cccagaaaacatatccagctaatacagaaactagcagtgaagccatgccagggagagcca
tccctgcagaacagtttggaacttgccatgcaaacattacgacacatgcctggtcatgcc
agtagagaaattctcatcatctatggaagtttaacaacctgtgatcctggggacatctat
gaaactgtaaagtctttgaaggagttaaacatcaggtgttccataattggcctggctgca
gaagtacagatatgcaaaaaaatatgtcaagaaactaaaggtagctatcatgttatactg
gatgagacccactttagagacctactgacctatcacgtgacaccacctccggccaggaat
aatgcagaatcttctctaataagaatgggtgaacctcattatcaatttcttctagaaata
aaatcacagtatccctctctatgtatatgtcacctggacagccagacattccaagggttt
cgcagtggaggatatttctgtccacagtgcaagagtaaatactgtgagctgccagtagaa
tgtaaagcctgtgggttaacactagtttcggctccacatctggccaggtcataccaccat
ttgtttccactagaatcgtacaaggaagtgcaggataaatcttcagttttgcagagtcac
tgtttttcctgccagacagaattcacagaacatcccgtgtatgtctgtggacggtgccag
agagggttctgcattgactgcgatgtctttatccatgaagctctccattcttgccctggg
tgctctgggtcccgtcacacacaggaacgccaaatctcagggacacttctggccgggtta
acagggaaatga
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