Lingula anatina: 106155648
Help
Entry
106155648 CDS
T04921
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
lak
Lingula anatina
Pathway
lak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106155648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lak03400
]
106155648
DNA repair and recombination proteins [BR:
lak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106155648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
106155648
NCBI-ProteinID:
XP_013386030
UniProt:
A0A1S3HIT5
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MSKAQNSILSYFSKTPKSEKTQNKEKNVLTPKQTRSSPNRSGSQGDKKEKATGKVAPGDV
VWAKLEGYPWWPSLVCNHPTLHTCTRTKGRNTDVHVQFFDNPPSRAWVKEKYVKPFTGSD
SADFQRGGQFFSADPQCRKGATEADKAVASSVADRLKLVVDLQPSSDEEEEEEEGTKIDD
IDWDDEIFDNEADNSKENHEEEEVGAETKSNKKKTPQKPTPKKNGRPSRGSKAKRRRIRL
PSDDSEDSGDEYKPAKSENESESEDSAGSGVDEADISEPETESDTGTPVKNSRKRKRGSV
TTSKTPGVATKAKENLSSFANTTPSSPLSGASTPLTPLSRSSTPHTPVSVSDKTKSKLMA
WAAPDTPPETSAPVSEDGTVYMHYTLDFLKPEKIKDIEGRRPDHTEYDPRTLYVPDTFKK
KLTPAMKQWWEIKSKHFDTVLFFKVGKFYELYHMDAVIGVTELGLMYMKGNFAHSGFPEI
AYSRYADTLIQKGYKAARVEQMESQESAEEKAAGKANKLMQRELCRITSKGTKTFNFMDG
DSTESGSDYLLAIAEKNSEESSGGESTYGVCFVDTSIGKFHIGQFSDDRHGSRLRTLVSH
FRPAEILYERGHISQKMQQIFNGHLTSALKEALTSGTEFWDSSKTLKFLSEGDYFLPGGE
NSEKFQWPQAIKAMISETDSLGLTASDEYELAIKALGAITWYLCRCCIDQELLSMKQFEE
YTPLDQKQNKKGVEFASGKQKMVLDSVTLFNLEVMENSVTGTTEGTLLERLDQCVTPFGK
RLFRQWLCAPLCNPSAIDDRLDAVEDLMAAQDVVTEVMELMKKLPDLERLLSKIHTLGNA
SRSKNHPDSRAIFYDDVTYSKKKIEDFLATLNGFKATQDIVLKFKGKGQNFKSRLLRQLV
TVQKSDTSNSAKFPDLVEKLRFFDQAFDQQKAKAQGVIVPSKGVDPEYDQSLDDIKSTQA
KLDTYLDQQRQRLGCRSLQYWGTGKNRYQLEVPEGVLQRVPDEYEFESQKKGFKRYRTKR
IMGLLAEMEAAETRKVDAQKDCMRRIFNSFDENYTSWHSAVQCMAVLDVLINMAAYSRCG
DGVMCRPQLVLPEDQDQPFLELREARHPCISATFSGGDFIPNDTVIGCHDDNAMETDGID
HSDSSIVLVTGPNMGGKSTLMRQVGVIVIMAQLGVYVPAEKCRLTPVDRVFTRLGASDRI
MSGESTFYVELSETSAILQHATRHSLVLLDELGRGTATYDGTAIACAVVRELSQNVRSRT
LFSTHYHSLVEEFTHDPNIRLGHMACMVENENDEDPSQETITFLYKFVSGACPKSYGFNA
ARLADIPEQIIKVARIKAQEFEEHADNLKVFRNICSTDEALGKDSLISLQNQIQVS
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagcgcagaactcgatcctttcctactttagcaagacaccaaagtctgaaaaa
acacagaacaaggaaaagaatgtcctgacaccgaaacagacgcgatcctcgccaaatagg
tcgggaagtcagggggacaagaaggagaaagcaactgggaaagtggcaccaggagatgtg
gtctgggctaagctggaggggtatccgtggtggcccagtttggtctgtaaccaccctacc
ttgcacacctgtaccaggaccaaaggaagaaacacggacgtacatgtgcagttcttcgac
aacccgccttccagagcctgggtgaaggagaaatatgtgaaaccattcactggctcggac
agcgctgatttccagcgtggtggacagttcttcagtgcggacccccagtgtcgcaaggga
gccactgaggcagacaaagctgttgcgtctagtgttgcggacagactgaaattggttgtg
gacttacagccatcatctgatgaggaggaggaggaggaggaggggacaaagattgatgat
attgattgggatgatgaaatatttgacaacgaggcagacaatagtaaagaaaatcatgaa
gaagaagaagttggtgcagagacaaaaagtaacaaaaagaaaactccccaaaaacccacc
ccaaagaaaaatggccgcccatccagaggcagtaaggccaagagaaggaggataagatta
ccaagtgatgacagtgaggattcgggggatgaatacaaaccagctaaatcagagaatgag
agtgagtctgaagatagtgcaggaagtggtgtggatgaggcagatatctctgaacctgag
acggaatcagatactggaactccagttaagaattcaagaaaaaggaaaaggggctcagtt
actacatctaaaacacctggggtagcaacaaaagctaaagaaaacctcagctcctttgcc
aacaccacccccagttccccactgagtggcgcatccacccccctcacccctctcagcagg
agttccacccctcatacccctgttagtgtcagtgacaagacaaagagcaagctcatggca
tgggctgccccagatacaccacccgagacgtctgccccagtcagtgaagatgggacagta
tatatgcactacacattggacttcctcaaaccagagaaaatcaaagacattgaaggcaga
agaccagatcacacagaatatgatccaaggacactctatgttcctgacactttcaaaaag
aagcttaccccagccatgaagcaatggtgggagattaaatcaaaacattttgacactgtg
ttgttcttcaaggttggcaagttctacgaactgtaccacatggacgctgtcataggggtg
actgagctgggactgatgtatatgaagggcaattttgcccactcgggtttcccagagatt
gcctacagtcgctatgccgataccttgatccagaaggggtacaaagcagccagggtggaa
cagatggagtcacaggagagtgctgaggaaaaagctgctggcaaggccaacaaactgatg
cagagagaactgtgtagaatcacttccaaaggcacaaagaccttcaacttcatggatggg
gacagtacagagagtgggagtgattacctcttggcgatagcagaaaagaatagtgaggag
agttctggaggtgaaagcacctatggagtgtgttttgtggatacctctattggaaaattc
cacattggtcagttttctgatgaccgccatgggtcaagactgaggacgttggtttcacac
tttagaccagctgaaatactgtatgaaagagggcatatatcccaaaaaatgcagcaaatc
ttcaatggtcacctgacgtctgctctcaaggaggccttgacctctggtactgaattctgg
gatagctccaagaccctcaagtttttatctgaaggagactatttccttcctggaggagag
aatagtgagaaatttcagtggcctcaggcaatcaaggctatgatatctgagactgacagc
ttaggactgacagcctctgatgagtatgaattagcaataaaggcattaggtgcaattact
tggtatctgtgcaggtgttgcatagaccaagaactgttgtctatgaagcagtttgaagag
tacactcctctggatcagaaacagaacaagaaaggagtggagtttgcatcggggaaacag
aaaatggtgctggatagcgtgaccctgttcaatctggaggtgatggagaacagtgtcact
gggaccacagagggcaccttgctggagagattggaccagtgtgtcacgccatttggaaag
aggctgttccgtcagtggctttgcgcccccctctgcaatccgtctgcaattgatgaccgt
cttgatgctgtagaggacctaatggcagcacaagatgttgtaactgaagtgatggaactg
atgaagaaattgccagacttagaaagacttctcagcaaaatccacaccttgggtaatgcc
agcagaagcaagaaccaccctgacagcagagccatcttctatgatgatgtcacctacagt
aagaagaagattgaagatttccttgctactttaaatggattcaaagcaacacaagacatt
gtccttaaatttaaaggcaaaggtcaaaatttcaagtcaagactcctgaggcagttggtg
acagtgcagaaaagtgacacgagtaactcagcaaagttccctgatctggtggagaagttg
cgtttctttgatcaagcatttgaccagcagaaggccaaggcccagggggtcattgtcccc
tccaagggggtagatcccgagtatgaccagtccctggatgatattaagtccactcaggcc
aaactggacacttatcttgaccagcagagacaaaggcttggatgcaggtccttgcaatac
tggggtactggcaagaatcgctaccagttagaggtccctgagggagtgctccaacgtgtc
ccagacgagtatgagtttgagtcccagaagaagggattcaagcgctatcgcaccaagagg
atcatgggattgctagctgaaatggaggccgcggagaccaggaaggtggacgcacagaag
gactgcatgaggaggatttttaatagttttgacgaaaattacactagctggcactccgct
gtacagtgtatggctgtactggacgtgttaatcaacatggccgcctacagcagatgtgga
gatggggtcatgtgcagaccacagctagtactccctgaggaccaagaccagccatttttg
gagttgagagaagctcgtcatccatgcatcagtgccaccttcagtgggggagacttcatt
ccaaatgacacagtgattggctgtcacgatgacaacgccatggaaacagatggcattgat
cactctgacagcagtatcgtcctggtaacagggcctaacatggggggaaagtccactctc
atgagacaagttggtgtcattgtcattatggctcagttgggtgtgtatgtcccagctgaa
aagtgcaggcttaccccggttgacagggtgttcacacgacttggtgccagtgacaggatt
atgtcaggtgagagcacattctatgtggagcttagtgagacttcagccatcttacaacat
gccacacgccattccctcgtcttactggatgagttagggaggggcacagcaacctatgat
ggcactgctattgcatgcgccgtagtgcgtgagttgtcacagaacgtgcgcagtcgtaca
ttgttctccactcactaccactcattagtggaggagtttacacacgatccaaacatcaga
ttggggcacatggcctgtatggtggaaaatgagaatgacgaggacccctcccaggagacc
attaccttcctctacaagttcgtgtctggagcttgtcccaaaagttacggctttaacgct
gccaggctggccgacatacctgaacagattataaaagttgccagaattaaagcacaggag
tttgaggagcatgcagacaacctcaaagttttcaggaacatctgcagtacagatgaagct
cttggaaaggacagtctgatttcattacaaaaccaaatccaagtatcttga
DBGET
integrated database retrieval system
