Lingula anatina: 106156050
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Entry
106156050 CDS
T04921
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
lak
Lingula anatina
Pathway
lak04137
Mitophagy - animal
lak04140
Autophagy - animal
lak04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106156050
04137 Mitophagy - animal
106156050
04148 Efferocytosis
106156050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lak03000
]
106156050
Transcription factors [BR:
lak03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
106156050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HIF-1
HLH
HIF-1a_CTAD
Motif
Other DBs
NCBI-GeneID:
106156050
NCBI-ProteinID:
XP_013386588
UniProt:
A0A1S3HKF2
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MCRSVVKARHNNHEDLDIEYFAGKSEKTNQDQEANSSVKRDPGRRKEKSRNAARERRGKE
AEVFSDLTNEIPLPQNATAQLDKASIMRISIAYLKLRSLMEQGAKPEPPRNALEKKADQL
FMKALEGFLMVISKEGDLVYLSETVTKYLGLSNVDFIGHSLFDFTHPCDHEEMREMLLPN
CHHLKNPMDKRIFFMRMKCTLTRNGRNVNLKSATYKVIKCSGHLIPHTEELAMKLGLKDG
KDLTCIALIGEPIPHPSNIEIPLDSRTFLSRHSMDMKYTFCDDRIQELVGYGGDDLIGKS
VYEFHHALDSEEIERSYKTLFSKGQTVTGQYRFLAKDGGFVWVVTEGTVIYNSRNQKPQC
VVCVNYVLSGIQQEKAIMSNFQSTPEYWPVADVGISRKTDRIWEPLPVDASGTKKETSTW
ADDEDLLQYAPAFGDACIPLPIPSSFSEELFDKGTSMYDGPFFEDDPLCPYPMKKEPDAR
NESFRQYVQRSSESVCDMDSNCSSTPPSEQQHVSPADTPAPPEALQTPVNLDSVMLDRLK
VSETGIYVDTMDNADDDEMEMYMRAPYIPMDSDQDFSLFHSSLLHPCVPDNENTGDRFAR
GSQGNALQRNKDPNSASGLKTMLCGPPPVSSTRLAFLPKTSQPPEPTHLPPMTSSTRQVL
SSNKSLASALLDNTGKFLVKRRCPPPAPPPDGSPVAAPPAHSNLWVRDKHPLGPADLQEG
PPLSKVLRLDTGQGQTRKDKVLASEQDQKSTVLMNLLLRGEDQNYGYRVHSQQPQTTHQK
LIRPTQQVLMARRYDKHETWGPHHEHSNHHHHHPQQRHDLFPSITETDIEMNTAPPMTAH
VAHLLSGEELLKALDSSSSASGGHHHHHHHHF
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgctcagtggttaaagcacgtcacaacaaccacgaagaccttgacatagaatat
tttgctggaaaatcagagaaaaccaatcaggatcaggaagccaactcatccgttaaaagg
gacccaggcagaagaaaagaaaaatcacgtaatgcagctcgcgaacgtcggggaaaggaa
gctgaggtgttttctgatttgaccaatgaaatcccactgccccagaatgccactgctcag
ctggacaaagcctccataatgaggatctccattgcttacctgaaactcaggtctttaatg
gagcaaggagctaaaccagagcccccaagaaatgccctggagaagaaagcggatcaatta
ttcatgaaggctttagaggggtttctgatggttatttccaaggaaggtgacttggtgtat
ttgtctgagactgtcaccaagtatttggggctatcaaatgttgacttcattgggcacagc
ctttttgacttcacacacccatgtgaccatgaagaaatgagggaaatgctcctcccaaat
tgccatcaccttaagaaccccatggacaaacgcattttcttcatgcgtatgaaatgcaca
ttaacaagaaatggccgaaatgtcaacctgaagtcagcaacgtacaaggtcataaaatgt
tctggacacctgataccacacacagaagaattggccatgaaattaggcttgaaggatgga
aaggatctcacttgtatagcattgataggggaacctataccacatccatccaacatagag
atcccactggatagtcgcacattccttagtcgccacagcatggacatgaaatacactttc
tgcgatgacagaattcaagaacttgttggatatggtggtgacgacttgattgggaagtct
gtctatgagtttcaccatgctttggatagtgaagaaatagaaagatcatataaaactttg
ttttctaaaggccagactgtgactgggcagtatcgtttcctggccaaagatggcggtttc
gtctgggtggttacagagggcactgtgatctacaacagtcgtaaccaaaaaccacagtgt
gtagtctgtgtcaactatgttcttagtggtatacagcaggagaaggccatcatgtccaac
ttccagagcactccagagtattggccggtggcagacgtaggcatttcacggaaaactgat
agaatctgggagccattaccagttgatgctagtggcacaaagaaggaaacttctacttgg
gcagatgatgaggatctgcttcaatatgctcctgcctttggagatgcctgtattcccctg
ccaattccatccagcttctctgaagaactgtttgataaaggaaccagcatgtatgatggg
ccgtttttcgaggatgaccctctgtgtccctacccaatgaagaaggagccagatgctaga
aatgaaagtttcaggcagtatgttcagcgcagcagcgaatctgtgtgcgacatggacagc
aattgtagttccaccccaccgtctgagcagcaacatgttagcccagctgataccccggct
cccccagaggctctccagacaccggttaatctggacagtgtgatgttggacagactgaag
gtcagcgagactggaatctatgtggacaccatggacaatgcagacgatgatgagatggag
atgtacatgagggccccctacatcccaatggattctgatcaagacttcagtctgttccac
tccagcttactacacccatgtgtgccagacaatgaaaatactggggatcgctttgccaga
ggcagccaaggcaatgctctccagcgtaacaaagatccaaattctgccagtggtttgaag
accatgttgtgtggccctcctcctgtctccagcactcgccttgcatttctgcccaagaca
agccagcccccagagcccactcacctgccacctatgaccagcagcacaagacaagttctg
tccagcaataaatccctggcctctgccctgttagataacacaggcaaattcttggtcaag
cgcagatgtccaccaccagcaccaccaccagatggcagccctgttgcagcccctcctgca
cacagtaacttgtgggttcgtgacaagcacccactgggaccagcagatctacaagaggga
ccgccactctccaaagtcctcagactggacacaggtcaaggacagacaaggaaggataaa
gttttagcttcagaacaagatcagaagagcactgttcttatgaaccttctcctgcgtggg
gaggaccaaaactatggctacagagttcattcccagcagccgcagaccacccatcagaaa
ctgatcagaccaacccagcaagtgcttatggctagaagatatgataaacatgagacatgg
ggcccccatcatgaacatagcaaccatcaccaccaccacccacagcagcgacatgatcta
tttccatccataactgaaaccgatattgagatgaacacggctcctccaatgacagcacat
gtggcacacttgctcagtggagaagaactgttgaaagcactggattcttcctcctctgcc
agtggtgggcaccaccaccaccaccaccaccacttctag
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