Lingula anatina: 106156484
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Entry
106156484 CDS
T04921
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
lak
Lingula anatina
Pathway
lak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106156484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lak03400
]
106156484
DNA repair and recombination proteins [BR:
lak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106156484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
TPR_HPS5_insect
Motif
Other DBs
NCBI-GeneID:
106156484
NCBI-ProteinID:
XP_013387202
UniProt:
A0A1S3HMF8
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MATVQSKHELQLDGIQEHGFLSYLRSLPEKPNTTIRFFDRNDYYTVHGPDAVFAAKEVFK
TTGVIKHLGSGANKVESVVLSKLNFESTVRDLLLVRQYRVEVYRNRAAGKNNDWSLAYKA
SPGNLTQFEDVLFGSNDMSVSVGVIAVKLGTENGQRVVGVGYGDATLRKFGVCQFPENDQ
FSNLEALIVQLGPKECVLASGEGSPEVSRLKQVIERSGVLITERKKADFSTKDNVQDLNR
LLKFKKGEQANSAALAEMDKTHAMAAVSALIKYLELLGDETNFHQFSLQSFDLSQYMKLD
AAAVNALNLMPSPNEGSNKNQSVLGLLNRCRTPQGQRLLAQWVKQPLIDKNRIEERLNVV
ESFVEDTELRQTLQEDQLRKVPDFQRLAKKFQKKRANLQDCYRVYQALEKMPYLLEALEK
HQGKHTPLLMELFTNPMKELLMDFSKFQEMVETTIDLDQVENHEFLIKPDFDEGLAELRE
KLDNVEKQIKAQLNKAAKDLNLEPNKVLKLESNSQLGYFFRLTRKEEKVLRNNKNYRTID
TNKSGVRFHNTPLRQLNEEFIALKDDYNEQQKSVVAEVIAIAAGYVEPMILLNDVIAHLD
ALVSFAHVSANAPIPYIRPRLLDKGAGILRLTEARHPCLEMQDDVAFIPNDAIFEKDKKM
FHIITGPNMGGKSTYIRSVGVIVLMAQIGCFVPCTEAEISLMDCILARVGAGDSQLKGVS
TFMAEMLETASILRTATDTSLVIIDELGRGTSTYDGFGLAWAISEYIATKIGAYCLFATH
FHELTALSDVVPTVNNLHVTALTTNDTLTLLYRVKPGVCDQSFGIHVAELAHFPKHVLEF
ARQKAQELEDYQSIDLKGTDLEGEGEPAVKKRKIAKQEGEELIKEFLTKVKALPVADLTQ
EQISCELNKLKAELAAKGNPYIQDLMARSV
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtgcaatcaaaacacgagttgcaattagacggaatacaggaacatgggttt
ctctcatacttgcgttctttaccagagaaaccgaatacaacaatacgttttttcgacaga
aatgattactatactgttcatggcccagatgcagtttttgctgccaaagaagtttttaaa
acaactggagtcattaaacatttaggatcaggtgctaacaaggtggagtcagtggtgctg
agtaagctgaactttgagtccacagtacgagatctgctgctggtgagacagtacagggta
gaggtttacaggaatagggcagctggcaagaataatgactggagtttagcctataaggcc
tccccaggaaatttgacccaatttgaagatgtgttgtttggcagcaatgacatgtctgta
tcagttggggttattgcagtgaaattagggacagagaatggacagagggttgttggtgtt
ggctatggagatgctacgctcagaaagtttggtgtctgtcagttcccagagaatgaccag
ttttcaaatttagaggcattgatagtccagttgggacccaaggaatgtgtcctggccagt
ggtgaaggttcccctgaggtctccagattaaaacaagtcattgagaggagtggggtgcta
atcactgagagaaagaaagctgatttctctactaaagataatgtgcaagatctcaaccgt
ctacttaagtttaagaaaggagaacaagctaacagtgcagcacttgctgagatggacaaa
acacatgctatggctgccgtatctgcactaatcaaatacttggagctcctgggtgatgag
accaactttcatcagttttccctgcaaagttttgacttgagccagtacatgaagctggat
gctgcagctgtgaatgcactcaatctgatgcctagcccaaatgaaggcagcaacaaaaac
cagagtgtgttgggactgttgaacaggtgtcgcaccccacagggacagagactgctggct
cagtgggtcaaacaacctcttattgataaaaacaggatagaggagagactgaatgttgtt
gagtcttttgtggaggacacagagctgaggcagacgttgcaggaggatcaactgaggaag
gttccagactttcagagattggccaagaaatttcagaagaagagagccaacttacaggat
tgctacagagtataccaggccttggagaagatgccttacttactggaggccctggaaaaa
caccaaggcaagcatacaccactgctcatggagctgtttacaaaccctatgaaggaattg
ctgatggatttctccaaattccaagaaatggtggagactacaattgacttagaccaggta
gagaaccacgagttcctcatcaaacctgactttgatgaaggcctagcagagctgcgcgaa
aaactagataatgtagaaaaacaaatcaaggcacaactgaacaaggctgccaaggatctg
aatctggagcccaacaaagtcctaaagctggagtctaattcacagcttggctatttcttc
agattgactcggaaggaggaaaaggtgttgaggaacaacaagaattacagaacaattgat
acaaacaaaagcggtgttcgctttcacaacacccccctacgtcagctgaatgaggaattc
atcgctctgaaagatgattacaatgaacagcagaagtctgtggtagcagaggtgattgct
attgcagctggttatgtggaacctatgatcctgctaaatgacgttatagcccacttggat
gccttggtcagttttgcccacgtttctgccaacgctcctattccctacatcaggcctcgc
cttctggataaaggtgctggcatattgcgtcttacagaggccagacatccttgcttggaa
atgcaggatgatgtggctttcattccaaatgatgccatttttgagaaagataaaaagatg
ttccatattatcacgggacccaacatgggtggcaagtccacttacataagatcggttggt
gttatagtcctgatggcacagataggttgctttgtgccctgcacggaagcggagatctcc
ctgatggactgtatactggccagggtaggggcaggggacagccagctcaaaggagtgtcc
actttcatggctgagatgttggagactgcttccattttaaggacagccacagacacctcc
ttggtgataattgatgagctaggcagaggaacctcaacatatgatgggtttggattggct
tgggcaatatcagagtacatagccaccaagataggagcctattgtctgtttgccacccac
ttccatgagttgacggcgttgtcagatgttgttcccacagtgaacaatctccatgttaca
gctctcactaccaatgatacactaacactgctgtacagggtgaagccaggtgtttgtgac
cagagctttgggatccatgtcgcagagttggcacattttccaaaacatgtccttgagttt
gccaggcagaaggcccaggaacttgaagactaccagagcattgatttaaaaggaacagac
ctggaaggggaaggggaaccagctgtaaagaagagaaaaatagctaagcaggaaggagaa
gaactgataaaagaattcctcaccaaagtgaaagcattacctgtggcagacttgacccag
gaacaaatcagttgcgaacttaacaagttgaaagctgaattagcagctaaaggcaatccc
tacatacaggaccttatggcacggagtgtgtga
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