Lingula anatina: 106156927
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Entry
106156927 CDS
T04921
Name
(RefSeq) THO complex subunit 5 homolog A-like isoform X1
KO
K13174
THO complex subunit 5
Organism
lak
Lingula anatina
Pathway
lak03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106156927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106156927
03041 Spliceosome [BR:
lak03041
]
106156927
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106156927
Spliceosome [BR:
lak03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106156927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
DUF5614
Inhibitor_I71
Motif
Other DBs
NCBI-GeneID:
106156927
NCBI-ProteinID:
XP_013387821
UniProt:
A0A1S3HQK4
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MSASSPKEKEKKKKRTIRPEISAPKIQVAKKPKNELSTGRQFSEEDEVEKRDPLDDLKEH
KQACSEIRNSIKSISAMKDAGKPDTGEVEELRTQGTLQFLVLKKLNRLAHIRCKKVRDST
NEAKQKIDQYHLQLQNLLYEVMHLQKEITKCLEFKSKDEEIDLVGVEDFYKEAPPEISRP
EVTKNDPHQQTLARLEWELEQRKRLSANFKETQNSKNLISQDIKSKKEYLESLQPKLVSI
MQATKPVQESLNMRFDEIQEQHQTAQHLPQPLYVLYMQSSAYKEACDKNMAVSIEGDVEA
AKTVESQQDQEQDEDSDSDQEEQEQSKRKSKHRRHTTSSDRLEQKREKLLKSHPLTVVLE
IKCKEEGTLHLVFSYLLVLKIVTVTVKLLPGKDVVSGNISGSDLLAPDSILTCLYPGDEG
KSTPNPANQFELNRLSMDSFSFYISKVGHPYLWVQWLSGLQFLTASPLTNDQVSSSHMEE
TIRRLRRRVASRLSLQKQLASLEHGSVPVSSEYMSLFPPKISSRLVSWRRSTYDDFAALP
YCKHLIDSCLAKDSDLFFTTCAERGSAKLKVEVVVSPDYPRTPPVMAVVLQWRTDHTNLN
DVNIRDMEAEVNIHYGELIKGKSHDQLLTNQIQRMLMCFDLFLETEAGNEAMEGPAEFPK
EKICPRMTRGPIRSKPYKYLPQMGIFTQR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaagttcgccaaaagagaaagaaaagaagaagaaaaggacaatacgaccagaa
ataagtgccccaaagatccaggtagctaaaaagccgaagaacgagctatcgactggtcgt
cagttctcagaagaggacgaagtggagaagagagatccactggatgacttaaaggaacat
aagcaagcatgcagtgagataaggaattccattaaaagtatatcagcaatgaaggacgct
ggtaaaccagacacgggagaggtggaggagctgcgtacacagggcacacttcagtttctt
gtgctcaagaaactcaaccgtttggcacacatccgctgcaagaaagtgagggacagcacc
aatgaggccaaacagaagatagaccaatatcacctacagttacagaacctgctgtatgaa
gtcatgcatttgcagaaggaaattacaaagtgtctggagtttaagtccaaagatgaagaa
atagaccttgtcggcgtggaagatttctataaagaggcacccccagaaatatcaagaccg
gaggtaaccaagaacgacccacatcagcagaccctggccagattggagtgggagctagaa
cagagaaaaaggttgtctgcaaatttcaaggagactcaaaatagcaagaacttgatatcc
caagatatcaaaagcaagaaggaatacttagagagcttacagcctaaacttgtctctata
atgcaggccaccaaaccagtgcaagagtctctgaacatgagatttgatgagatccaagag
cagcaccagactgcacaacatcttcctcagccactgtatgtcctgtacatgcagtcatca
gcctataaggaagcatgtgataagaatatggctgtcagtatagagggagatgttgaagca
gcaaaaacagtggaatcccaacaagaccaagagcaagatgaggacagtgacagtgatcaa
gaggaacaggaacagtccaagaggaaatctaagcatcgccgccatactacctctagtgac
cgtctggaacaaaagcgtgaaaaactgctgaagagccacccactgacagtggtgctggaa
atcaaatgtaaagaggaaggaaccttacacctggtgttttcctaccttcttgttttgaag
attgtgacagttactgtcaagctgttgccaggaaaagatgttgtttctggcaacatatct
ggaagtgaccttcttgccccagattcaattctaacatgcctgtaccctggggatgagggg
aagagcacgccaaatccagctaatcagtttgaattgaatagactcagcatggacagcttc
agtttttacatttcaaaagttggtcatccatacttgtgggtgcagtggttgtctggcctt
cagttcctgaccgcctcccccttgaccaatgaccaagtgagcagtagccacatggaggag
accatccgcaggctgaggagaagggtagcgtccagactgtccctacaaaaacagctggct
tcattagaacatggcagtgttccagtgagctcggagtatatgagtctgtttccccctaag
atttctagcaggctggtttcctggagacgcagcacatatgatgactttgctgctcttcct
tactgcaagcatttgatagatagctgtctggccaaggattccgatctattcttcactact
tgtgccgagagaggatcagctaagcttaaggtggaagtagtggtcagtccagactaccca
agaactcctccagtaatggcagtggtactccagtggaggacggatcataccaatctcaat
gatgttaacatcagggacatggaagcagaggtgaacattcactatggcgagctgatcaag
gggaagtcacatgaccagctgttaactaatcagattcagaggatgttgatgtgctttgac
ctgttcctggagacagaagctggtaatgaggccatggagggcccagcggaattccccaag
gagaagatttgtccaaggatgacaaggggacctattagaagcaaaccatacaaatacctg
cctcagatgggaattttcacccaacgataa
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