Lingula anatina: 106157679
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Entry
106157679 CDS
T04921
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
lak
Lingula anatina
Pathway
lak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106157679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106157679
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106157679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
106157679
NCBI-ProteinID:
XP_013388851
UniProt:
A0A1S3HTH6
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MAADFKTAQPVEYYRKFVEKDVRPDGRELGEIRPTMINIGSISTAEGSALVKLGNTTVLC
GVKAEVTNPKSEEPDKGIIVPNVDLPALCSPRFRPGPPSEQAQVVSQFMVEVIQNSGCID
PKDLCIKAGKHVWVLYCDLVCLDYDGNVTDACVLALMAALKNVSLPKVTLNEESGNLETH
MQEKWGLNILCQPVATTFAIFDDCIVFADPTDEEENLATGKVTIVTTEEDKICFVHKPGG
SPLSDDKLQNCLQRSFIRAREARNLVETTLVNVDR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgacttcaagacagcccagcctgttgaatattatagaaagtttgtggaaaaa
gatgtcagacctgatggacgtgaactgggggaaatacgtccaacaatgatcaacataggt
tctatttctacagcagagggatctgccctagtgaaattggggaataccacagtgctttgt
ggtgtcaaagctgaggtgacaaacccaaagagtgaagaaccagataaagggataatagtt
cccaatgttgacctcccagcgttgtgttcccctagattccgtccaggccccccaagtgag
caggcccaggtggtcagccagtttatggtggaagtcattcaaaattctggctgtatagat
ccaaaggatttatgtattaaagcaggaaagcatgtgtgggttctgtactgtgacctggtt
tgtctggactatgatgggaatgtgactgatgcttgtgtgctggctttaatggcagccctt
aaaaatgtttccctgcccaaagtgacactcaatgaggagtcgggtaacttggagacacac
atgcaggagaagtgggggttgaacatcctgtgccagcctgttgccactacatttgccata
tttgatgattgcattgtatttgctgatccaacagatgaagaggaaaaccttgccacggga
aaagttaccatagttacaacagaagaagacaagatatgttttgtacacaagccagggggc
agtcctctctctgatgacaaactacagaattgtttacagcgctcattcatacgagcaaga
gaggccaggaatctagttgaaacgactttagtcaatgtggacaggtga
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