Lingula anatina: 106158403
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Entry
106158403 CDS
T04921
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
lak
Lingula anatina
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lak03016
]
106158403
Enzymes [BR:
lak01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
106158403
Transfer RNA biogenesis [BR:
lak03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106158403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
CSF-1
Motif
Other DBs
NCBI-GeneID:
106158403
NCBI-ProteinID:
XP_013389808
UniProt:
A0A1S3HUW4
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MADRKQMPGEFKPGRCGFYLEKKRRYCRAVPNEGNKYCIEHSHLLGELKDQERIPCPLDP
KHSCYKSKLKKHLKKCNAREKVQPACYQKSVNSGYGEDETETEKVTILTVPVEEVFQLIE
KVKNIHEKCQLLIQEEILEHPVMREELSNKTYGEAALKHRRQQSSLVAHMQKLGLLKDGT
CFVEFGAGKGALSHWVQLALPESKDNSYILVDRGTARYKMDNYHNNKEEGPIFERLRMDI
EHLCLSKVPTVIDHPRAVVGMSKHLCGAATDLTLRCMVGSNKCEKECTGDLGHVNKKQKV
DESTKPNEKQENSWIEGIIIALCCHHRCSWTHFVGKDFFTQHGLTGRDFQLVTSMSSWAT
CGYRPNKKGVDLTLRCMVGSNKYKKECTGDLGHVNKKQKVDESTKPNEKQENSWIEGIII
ALCCHHRCSWTHFVGKDFFTQHGLTGRDFQLVTSMSSWATCGYRPNKKGVEKSSSAQEPS
KAPTPYSSLDQNLVKIENKTLVEENMPDQSETSSCQSDMKQKNHDKHIDEHNSDDGGEHA
KNEDSGYNHPRYGALTPKQREDIGKQCKRLIDLGRMHYLKQKGFQTQLMVYIPHTVSLEN
VVLTAVPLDRFGAMLAEGNSLQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagaaaacaaatgcctggtgaattcaagccaggaagatgcggcttttatctg
gagaagaaaaggcgatattgcagggcagtaccaaatgaaggaaataaatattgcatagag
cattcacatctacttggggaattgaaggatcaagaaagaattccctgtccattagatcca
aagcactcctgctataaaagcaaattgaagaagcaccttaaaaagtgcaatgcccgagaa
aaagtacaacctgcctgctaccagaaatctgttaattctggatatggcgaggatgaaact
gagacagagaaggtcacaatcctgacagtgccagttgaagaggttttccaactgatagaa
aaggtcaagaatatccatgaaaagtgccagctactcatccaggaggaaatccttgagcat
ccagttatgagggaagagctgagcaataaaacatatggagaagctgcactgaaacacaga
agacagcagtcatccttggtagctcatatgcagaaattaggtttgttgaaggatggaaca
tgttttgtagaatttggagcaggaaaaggtgcactgtcccactgggttcagctggctctt
ccagaatccaaggacaatagttacatactagtggacaggggtacagcaaggtacaagatg
gataactaccataacaacaaagaagaaggtcctatatttgaaagattgagaatggacata
gagcatctttgtctgagtaaagtgccaacagtcatcgaccatcccagggctgtggtaggg
atgagcaagcacttgtgtggagctgcaactgatctgacattgcgatgcatggtagggtct
aataaatgtgaaaaagagtgtacaggggatttaggccacgttaacaagaagcagaaagtg
gatgaatcaaccaagccaaatgaaaaacaagaaaatagctggattgaaggaatcattata
gcactttgctgccatcatcgctgttcatggacacattttgtgggtaaagatttcttcact
cagcatggactgactggccgtgactttcagctggtgaccagcatgtcaagctgggcaact
tgtggatacaggccaaacaaaaagggtgtggatctgacattgcgatgcatggtagggtct
aataaatataaaaaagagtgtacaggggatttaggccacgttaacaaaaagcagaaagtg
gatgaatcaaccaagccaaatgaaaaacaagaaaatagctggattgaaggaatcattata
gcactttgctgccatcatcgctgttcatggacacattttgtgggtaaagatttcttcact
cagcatggactgactggccgtgactttcagctggtgaccagcatgtcaagctgggcaact
tgtggatacaggccaaacaagaagggtgtggaaaaatccagttcagcacaggaaccaagc
aaagctccaaccccttattcctcactggatcaaaatctagtcaaaattgaaaacaaaact
ttagttgaggaaaatatgcctgaccaaagtgaaacaagcagctgtcaaagtgacatgaaa
cagaaaaatcatgacaaacacatagacgaacataatagtgatgatggtggtgaacatgca
aaaaatgaagacagtggttataatcatccaaggtatggagcacttactccaaaacaaaga
gaagatattggaaaacaatgcaaaagactgatagaccttggaaggatgcactacctcaaa
caaaaaggtttccagacacagctaatggtctatattccccatacagtctccttagaaaat
gtggtgcttactgctgtgccattagataggtttggtgctatgcttgctgaaggcaattcc
ctccagtag
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