Lingula anatina: 106158536
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Entry
106158536 CDS
T04921
Name
(RefSeq) transducin beta-like protein 3 isoform X1
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
lak
Lingula anatina
Pathway
lak03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106158536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lak03009
]
106158536
Ribosome biogenesis [BR:
lak03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106158536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Utp13
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_IP5PC_F
Beta-prop_SPT8
Cytochrom_D1
WD40_like
Beta-prop_WDR19_2nd
Ge1_WD40
Hira
Motif
Other DBs
NCBI-GeneID:
106158536
NCBI-ProteinID:
XP_013390030
UniProt:
A0A1S3HVG7
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MSTKLKTSFAVDSRYNAFYTGGKVQFSKDGSFMLCSSGNQLQILDVQTGRIHSTIGQNEE
EEEITSFILSPDDQTLIVAGRNLQLRQWEWKENKIERTWKAVHNAPVTCMAFDSTSTLVA
TGSADSTIKIWDIIKQYCTHNLRGHTGVVTGVAFHPDIERMQLISAAEDYKIRVWDLMKS
SCIAVLDKHFSVITGLQFTEDGDTLYSCGRDSVVVVWDLHSFLCLKTIPVFEPVESVLLL
SPNMDYPKLSVVAGEQHFITAGSKGILKVWNTSKAACVYTQEDSPVALAARSREVEESDQ
RSNITQAIHCPSNGAITVVTFDHYIIMFDLEGFEVKKQFAGYNDDILDIHFLGEQESHIA
VATNSELIKVFELSTWNCQILHGHTDIVLSLDVYQKGNLLVSSSKDNSIRLWQIDGDTQK
MSCVAVGQGHTHAVGAVAFSRLAPSFIVSGSQDCTIKLWSVPDNHCGNSVTNLHANMTEK
AHEKDINSITVSPNDKLLATGSQDRTAKVWNASSLSLLGVCRGHRRGIWCVQFSPVDQCL
ATSSSDGTIKIWSLSDFTCVKTFEGHDTSVLKVIFLTRGMQLMSSGSDGLLKLWNIKNNE
CIKTLDEHTEKAWALTANKKGDIIVSGAADSSIIVWKDTTETEIEEAKAKEEDTIIKEQE
LSNLLQQKKYLKAIGLAITLEQPFRVLNIMKEILSQPTGQQDLADTVLKLRMDQADAVLR
FSVQWNTNSKHCHVAQFVLSVVLKGYPPEELMKLPNFKATVEGLLPYTERHFQRMKRLQQ
QATFTDYTWQCMKLGQSDSRVKDNEASHSATNMETENFVGKTQDPKDGASQEMVDETDDL
GERIRKAVQQRLKELDQISEKQSGGKTSESEHIEVDKGNGENDGENVITNEKTNLKAKKK
NKNKKSDLTDLQRDQEEETSPAEKVTTRLEHAKKKKTKKGFKTPDSMNKRKVHSKENGIT
ETNRSSKRRKSSAK
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaaattaaaaaccagctttgctgtggatagcaggtacaatgccttttacaca
ggtggcaaagtacagttctccaaagatggcagcttcatgttgtgtagctcaggtaaccag
ctccagatcctggatgtccagactggacggattcacagcactattggacagaatgaagaa
gaagaagaaatcactagttttatactaagtccagatgatcagacattgatagtagccggc
agaaatttgcagctaagacagtgggagtggaaggaaaacaagatagaaagaacatggaag
gcagtgcacaatgcccctgtgacatgcatggcctttgacagcacctccacgctggttgcc
acggggagtgcggactccaccatcaagatctgggacattatcaaacaatactgcactcat
aacttgagaggacacacaggagttgtgacaggtgttgccttccatccagacattgagaga
atgcagttgataagtgcagctgaagattataaaatccgtgtctgggacctcatgaaaagt
agttgcattgctgtccttgacaagcacttcagtgtcatcactgggctgcaattcactgaa
gatggcgacaccttatacagttgtggcagagacagtgtagtagtggtgtgggatctgcat
tcctttctctgcctgaagactatcccagtgtttgagccagtagaatctgtgttgcttttg
tcacccaatatggactatcccaaattgtcagtggtagcaggggaacagcatttcataaca
gctggaagcaaaggtatactgaaagtttggaacacctccaaggcagcatgtgtctacaca
caagaggacagcccagttgccttggcagcaagaagcagagaagttgaagaaagtgaccaa
aggtcaaacattactcaagccatacactgtccatccaatggggctattacagtggtcact
tttgaccattatatcataatgtttgacttggaggggtttgaagtgaaaaagcagtttgca
ggttacaatgatgacatcctagacatccattttcttggggagcaggaaagtcacattgct
gtggcaacaaacagtgaacttatcaaagtgtttgagttgagcacctggaactgccagatt
ctccatggccacacagatattgtgcttagtttagatgtctaccaaaaaggaaaccttcta
gtcagcagttctaaggataacagtatcaggctatggcaaatagatggtgatactcagaaa
atgagctgtgtagctgtaggtcaaggtcacacccatgctgttggagcagtagcattttca
agacttgccccaagttttattgtcagtggcagtcaggattgcaccatcaagctgtggtca
gtgccagacaatcattgtggcaactctgtgacaaatcttcatgctaacatgacagagaag
gcacacgagaaggatattaattccatcacagtgtcacccaatgacaaattattggccaca
ggatcccaggataggacagctaaagtatggaatgctagtagcctgtctctcctaggtgtg
tgtagaggtcacaggagagggatatggtgtgtccagttctctcctgttgaccagtgtttg
gccacctcctccagtgatgggaccatcaagatctggtccctctctgatttcacctgtgtt
aagacatttgaagggcatgacacatctgttctgaaagtaattttcttgaccagagggatg
cagttgatgtcaagtggatctgatggtctgctgaagttgtggaatatcaagaataatgaa
tgtattaagactttggatgagcacactgagaaggcttgggctctcacagccaataaaaag
ggagacatcattgtcagtggggcagctgactccagtatcattgtttggaaggacacaaca
gaaactgaaatagaagaagcaaaagccaaagaggaggataccattatcaaggaacaagaa
ctttccaacctcctacagcaaaaaaagtacttgaaagcaataggattggccatcactcta
gaacagccattcagagttctgaatatcatgaaagagatcctgagtcagcctacagggcag
caagacttggcagatactgtgcttaaactgagaatggaccaagcagatgcagtcctgagg
ttttctgttcagtggaacactaatagtaagcattgccacgtagcccagtttgtgctgtca
gtggtgctgaagggttacccccctgaggagctgatgaagctgcccaactttaaagccaca
gtggagggtctcctaccatatacagagcgtcatttccagaggatgaagagattgcaacag
caggccacctttacagactacacgtggcagtgtatgaagctggggcaaagtgatagcagg
gtaaaagataatgaggcatcacacagtgctactaacatggagactgagaactttgtgggt
aaaacccaggatcctaaagatggtgcttctcaggaaatggtggatgaaacagatgatttg
ggagaaagaatcaggaaagctgtacagcaaaggttaaaagaactagatcaaatatctgaa
aaacaatctggaggaaagactagcgagtctgaacatattgaggtagataaaggtaatggg
gaaaacgatggagaaaatgttataacaaatgagaaaacaaacttaaaggcaaaaaagaaa
aacaaaaacaaaaaatcagatttaacagacttgcaaagggaccaagaggaagaaacctca
cctgctgagaaagtgactacaagattagaacatgcaaaaaagaagaaaacaaagaaggga
ttcaaaactcctgattctatgaataaaagaaaagttcattctaaggaaaatgggatcaca
gagacaaacaggtcatcaaagagaaggaagtcttctgcaaagtga
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