Lingula anatina: 106158595
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Entry
106158595 CDS
T04921
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lak
Lingula anatina
Pathway
lak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106158595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106158595
03012 Translation factors [BR:
lak03012
]
106158595
Enzymes [BR:
lak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106158595
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106158595
Translation factors [BR:
lak03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106158595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_14
AAA_19
ATPase
NACHT
NPHP3_N
PhoH
ABC_tran
AAA_16
AAA_23
NB-ARC
ATPase_2
TsaE
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
106158595
NCBI-ProteinID:
XP_013390106
UniProt:
A0A1S3HX25
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MNALRTGLRRVFRFPGRASACFSDTLLDMSGKDSWRGEGYHSHDNSSHGYREEGSWRGRR
GGRGGGYRGRGNRNYSSGGYGNRNKKYYKTEDGAISGNREDAQHGHHDNRGGSEYSGRGG
GRRGRGGPPAGLRGREIGMWFAQRSKAKAKNSRQEVHLDEGRERHITNLLHRIQSRDNIP
PQPSRSYRDPTDITREADQIEDPIGGATSRDYFDDPDAEDIQMKDLESTSWHTDMTEEAS
NLYGLDQASSSRPASASAPGPSSATSTEPGDDDADDDEVTNLTEVFKHHEETNEFVLEYL
QHKKRGDIFSGSVHGALAYERNAAMDSQYRNELAKKEQSTRYIEMQKFRSQLPSYGMRKE
IVDVIEKNQVVVISGETGCGKTTQVSQFLLDHYIENNKGSLCRVVCTQPRRISAISVAER
VAQERDDPCGSQSVGYSIRLDSKLPRPQGSILFCTTGILLKYLESDPYMSKTSHVILDEI
HERDLMSDFLMIILKDLIKRRKDLKVVLMSATLNAEQFSEYFGGCPMIHIPGFTYPVEEI
YLEDVIETIRYSPPENTSNKPQRRIYGRRKREMLAQKEEEEWLLNEWIASIRHKYSPDTL
QTLRTMDYDKIDVMLIEQLIKYIIKTSDDGAILVFLPGWEDIKKLNEVLTANFMFKTDSF
RIIPLHSMMPTVNQRQVFERPPPGVRKIIIATNIAETSITIDDVVFVIDAGKIKLSNFDA
QSNVATLLPEWVSKANARQRRGRAGRVQPGKCFHLFTTYQERQLKDYQLPEMLRTRLEEL
CLQIKLLKLGKIEPFVSKAMQTPSMEALNKAVINLTDMNALDHNEDLTPLGFHLAKLPVD
PHIGKMILFGAMFCCLDPILTVAASLSFKDPFVVPLGKEQQADAKKRELSQGSQSDHLML
VYAFRNWERMLDRGGTSSAQKYCWDNFMSPSTLRMIQSMKGQFAQLLYDVKFVGSADPKQ
PAANLNSYNTNLLKAVICAGLYPNVGRVKQLKMGPKVNTKTERCSIHPKSVNCKERQCQS
QWMVYHLKMRSTNVFLYDSTVVSPYPLLFFGGDIGVKKDEDMDCVTVDDWIIFKSSAKTA
NLVKDLRRELDKLLEEKITRPGLTQWDGNTKEGAIMQAITDLLTKE
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacttagaactgggctaagaagagtttttcggtttcccggaagagcatctgcc
tgtttctctgacacattattagacatgagtggcaaggactcttggcgaggtgaaggctac
catagccatgacaacagtagccatggatacagggaggagggctcttggcgaggaagaaga
ggtggcagaggtggaggatatagaggccgtggcaacagaaactatagttctggaggctat
ggcaatagaaacaaaaagtattataagacagaagatggagccatctctgggaacagggag
gatgcacagcatggtcaccatgacaacagaggtggttctgaatactcggggagaggagga
gggaggagaggaaggggaggacccccagctggacttagaggcagagaaataggaatgtgg
tttgcccagaggagtaaagccaaagcaaaaaacagtaggcaagaagtacatctagatgag
ggtcgtgaacgccacatcacaaaccttctccacagaatacagtcaagagacaatataccc
ccacagccatcacggtcctacagagatcccactgacattactcgggaagctgaccagata
gaggatcccataggtggcgccactagcagagactactttgatgatccagacgctgaggat
attcagatgaaagatctagagtccacttcttggcatacagacatgactgaggaagcatca
aatctgtatgggttggaccaagctagctcgtctcgccctgcttctgcttctgcccctggt
cccagttcagctaccagcactgaacccggggatgatgatgctgatgatgatgaagtgaca
aatttaactgaagtctttaagcatcatgaggaaacaaatgaatttgttctggaatacttg
cagcataagaagaggggggatatatttagcggttctgttcatggagcccttgcatatgag
aggaatgcagccatggattctcagtacagaaatgaactggcaaagaaagaacaaagcacc
agatatattgaaatgcagaagtttcggtcccagctgccaagctatgggatgaggaaggaa
atagtggatgtcatagaaaaaaaccaagttgtagtaatcagtggagagacaggctgtggc
aaaacaactcaggtgtcccagtttctccttgaccactatatagaaaacaacaaggggtct
ctctgcagggtggtgtgtacccagccaaggagaataagtgccatatcagttgcggagcgt
gttgcccaggagagggatgatccgtgtggctctcaaagtgtgggttacagcatacgactg
gattcgaaacttcctcgccctcagggttccatattattctgtaccactggtattttacta
aagtacctggagagtgatccatatatgtcaaagaccagccatgtaattttggacgagatc
catgagagagacttgatgtcagatttcttaatgattatacttaaagatctcattaagaga
aggaaagacctcaaagtagttttaatgagtgccacattgaatgctgaacagttttcagag
tattttggcggatgccctatgattcacataccaggattcacataccctgtagaagagatt
tatctggaggatgtcattgaaacaataaggtattccccacccgagaacacttctaacaaa
ccacagaggagaatctatgggaggaggaaaagagagatgttggcacagaaagaagaagaa
gagtggctgcttaatgaatggattgcctccatacgtcacaagtattcccctgatactcta
cagaccctgagaacaatggactatgacaagatagacgttatgttgatagagcagttgatc
aagtatatcatcaagactagtgatgatggtgccatactggtgtttttgccagggtgggaa
gacatcaagaaactcaatgaagttctcactgcaaactttatgtttaaaacagattcattc
agaattatacctctccactctatgatgcctacagtgaaccagcggcaggtgtttgagcgc
ccgccccctggtgtcagaaagatcattatcgccacaaatattgctgaaacaagcatcacg
atagatgatgttgtttttgtgatagacgctgggaaaatcaagctgagtaacttcgatgct
caatccaatgtggcaactctgttaccagagtgggtcagcaaggctaatgcgagacagcga
agggggcgagctggcagggttcagccaggcaagtgttttcacttgtttacaacttaccaa
gaaaggcaactcaaagactatcaactccctgagatgttgagaactagactggaagagttg
tgcttacaaattaagctgttaaaactgggtaaaatagagccctttgtgagcaaagccatg
cagactccgtccatggaggccctcaacaaggcagttataaacctcactgacatgaatgcc
ctggaccacaacgaggatctgacccccctggggtttcatcttgccaaactccccgtggac
ccccatattggaaagatgatcctgtttggagccatgttctgctgtctggatcctatcctg
actgtggcagccagtctcagctttaaggatccatttgtagtcccattgggcaaagaacag
caagcagacgccaaaaagcgtgagctatcccagggttctcagagtgaccacctgatgctg
gtttatgcttttcgtaactgggagcgcatgttagacagaggaggcacgagcagcgcacag
aagtattgttgggataatttcatgtctccctcaacacttaggatgattcagtctatgaaa
ggacagtttgctcagcttctctatgatgtgaagtttgttggatctgccgaccccaaacaa
cccgctgccaatttaaattcttataataccaatttgctgaaagctgtgatatgtgcaggt
ctctatccaaatgtcggcagagtcaagcagttgaaaatgggtccaaaggtgaacacaaag
acagagagatgcagtattcacccaaagtctgtaaattgcaaagagagacagtgccagtca
cagtggatggtgtatcatctgaagatgaggtccacaaatgtttttctctatgacagcaca
gtggtatctccatacccattgcttttctttggaggggacattggcgtcaaaaaggatgaa
gatatggactgtgtgactgtagatgattggatcatttttaaatcttcggccaaaacagca
aatctagtcaaggatcttcgacgtgaactcgacaaacttttggaagagaagatcacaaga
ccaggccttacccaatgggatgggaacactaaagaaggggcgataatgcaagccatcacc
gatctattaactaaagaatag
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integrated database retrieval system
