Lingula anatina: 106159769
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Entry
106159769 CDS
T04921
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
lak
Lingula anatina
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lak03009
]
106159769
03012 Translation factors [BR:
lak03012
]
106159769
Enzymes [BR:
lak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
106159769
5.6.2.5 RNA 5'-3' helicase
106159769
Ribosome biogenesis [BR:
lak03009
]
Eukaryotic type
Other ribosome biogenesis factors
106159769
Translation factors [BR:
lak03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106159769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
R3H
AAA_19
zf-AN1
Viral_helicase1
ResIII
nSTAND3
DEAD
AAA_16
IstB_IS21
UvrD-helicase
AAA_22
Helicase_RecD
ABC_tran
PhoH
AAA
Flavi_DEAD
AAA_25
NTPase_1
ATPase
Glyco_tranf_2_3
SLFN-g3_helicase
MeaB
Zot
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
106159769
NCBI-ProteinID:
XP_013391625
UniProt:
A0A1S3I038
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MEQMSVEDFVCKCSELLEEERGAEIEETRVLQENVSPKELQRRGVCLLKLRVQSRHTGMY
GRSMLTMQPFWPGSELPSHNLSPGDIVGISPSSGDPRVDQIASGIVSKVGQSSISVAFEE
SFDSLQVEDDTQYKLIKLANDVTYRRLKKALEQLNNYRTGVSSQLINILFGSADVSIPYT
GTSGGGVKDLAFINPHLDESQQAAVEFALNQREVAVIHGPPGTGKTTTVVEIILQAVRQG
MKILACAPSNIAVDNLVERIGGASKAKAVRLGHPARILPGIQKYALDAILATSEETKLVE
DVRKDLDITLTKMRRTRNKGERQSMREEMKYLRKELHQRETAAVREILKRADVVLGTLTS
ATEDGPLKHLDDQHFDLVVIDECSQSLEAACWIALLKGPRCILAGDHQQLPPTIISHKAA
KGGLEVTLMERVLKLHGDKVMRMLTMQYRMHELIMNWSSEQLYHGKLVAHESVAKHLLKD
LPGIETNENTTLPLLLIDTAGCELLELETSDEVSKGNEGEAGLVTAHVESLIASGLSAED
IAVIAPYNLQVDLLRLRLSAKYPKLEVKSVDGFQGREKEAVVISLVRSNSKGEVGFLAED
RRINVAITRARRHLAVICDSETVSHHAFLKSLVDYFNKHGEVRSAHQYQNELDLSSHYEL
PEHIQSSMTKASSGNTCKEQKENSGARPKANQAKKKKENKRPGTASETAGARPHLSEIKQ
PTDEDKEELLTSIETEIMDFMADQNRTEHSFPSSLSSRGRFVVHEIAERLGITHISQGEG
QSRHIMISKQPPAVSTETQRSDSAPSNVQREKDNNGVGTRGQNKKEKRNEEFCNNHQSLS
LCSGPDEAILQQEQLAVITCERCLKKIPSQNYELHSLRCSGSNNATKPEPQKEQSKTKKK
NKKPKSAKNEASSKEAQEEDFDALIAEAMTLNGVCNFHRCKTNVLTLGQNCEFCAKRFCL
AHHIPEVHGCGDAAKSRARMLISKEGVIYRGGGVPNKKPDPAKRAHLQRKLDSKLHEFEE
KRQTKKKDKGK
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaatgtctgtagaggattttgtctgcaaatgttcagagctgttagaagaagaa
aggggagctgaaattgaagaaacgagagttctacaagagaatgtgtcacccaaagaactc
cagaggcgtggcgtgtgcctcctcaagctgcgcgtgcagagcaggcacacagggatgtat
gggcgaagcatgctcacaatgcaaccattttggcctggaagtgaacttccatcacacaac
ctcagtccaggtgacatagtaggtatcagtccatcatctggtgacccccgggtagatcag
atagcatccggcatagtgtccaaggtggggcagagctccatcagtgtggcctttgaggag
agttttgacagtctgcaggttgaggatgatacacagtacaagctgatcaaattagccaat
gatgtcacttacaggaggctcaaaaaagccctagaacaactgaataattacaggacaggt
gtaagttcacaactgataaacatactgtttggaagtgctgatgtcagcataccttacact
ggcacatctggaggtggagtaaaagatcttgcctttatcaaccctcacctagatgagtcc
cagcaagctgctgtggagtttgcattaaatcagagagaggtggcagtgatacatggaccc
ccagggacaggaaagaccaccacagttgtagagatcatactacaggctgtcaggcagggg
atgaagattttagcatgtgctccttccaacattgctgtggataatcttgttgagaggata
ggtggtgctagtaaggctaaagcagttcgtcttggccacccagcaagaatattaccaggt
attcagaaatatgctctggatgccatcttggctacaagtgaggaaaccaagttggtagaa
gatgtcaggaaagatctcgatataacattgaccaaaatgaggcgaactcgcaacaagggg
gagcgacagtcaatgagagaggagatgaagtatctgaggaaggagcttcaccagagggag
actgctgctgtgcgagagatcctaaagagagcagatgttgtgctggggaccctgaccagt
gccaccgaggatggacccctgaaacatttagatgaccaacacttcgacctagttgtcatt
gatgagtgttctcagtccctagaagctgcctgctggatagctcttctgaagggaccgagg
tgtatcctggctggcgaccaccaacaactgcctcccaccattatttcacacaaggctgcc
aagggaggtctagaggtcactctaatggagagagtcctgaagcttcatggagacaaagtg
atgagaatgctgacaatgcagtacaggatgcatgagctgatcatgaactggtcatcagaa
cagctgtaccatgggaaactggtggctcacgagtctgtggccaaacacctgttgaaagat
ttgccagggatagagaccaatgagaacaccactttaccattgctgctgattgacacagca
ggatgtgaactcctggagctagagacctcagatgaagtttccaagggaaatgaaggtgaa
gctggcttggtaactgcccatgtggaatctctgatagccagtggactgtcagcagaggac
atagcagtgatagccccttacaatctacaggttgatcttctccgtcttcgtctgtctgcc
aaatatcctaagttagaagtcaagtcggtggatgggttccagggcagagagaaggaagct
gtggtcatttcattggtcagatctaacagcaaaggtgaagttggatttctagctgaagac
agaagaataaatgtagctataactagagcccggcgccatctagcagtgatatgtgacagt
gagacagtcagtcaccatgctttcctcaagtccctggtggactactttaacaaacatgga
gaggttagaagcgcacatcagtaccagaatgagctggacctgtctagtcactatgaactt
ccagaacacattcaatcatccatgacaaaagcaagctctggaaacacatgtaaggaacag
aaagaaaacagtggtgcaagaccgaaagcaaatcaggcaaagaaaaagaaggaaaacaaa
agaccagggactgcctcagagactgctggagcaagacctcatctgagtgaaatcaaacaa
cctacagatgaagacaaagaagagttgttgactagcatagagacagaaatcatggacttc
atggctgaccagaacaggacagagcacagttttccatcctcattgtcttcaaggggaaga
tttgttgtgcatgagatagcagagagattgggtatcacccacatcagtcagggagaaggt
cagtcaaggcacatcatgattagcaaacaaccacctgctgtctcaacagaaacacaaaga
agtgacagtgccccaagtaatgtgcaaagagagaaggacaacaatggtgtaggaacccgt
ggtcaaaataaaaaagagaagagaaacgaggaattctgtaacaatcatcaaagtctctct
ttgtgctctggaccagatgaagcaatactacagcaagaacagctagcagtgataacatgt
gaaaggtgcttgaaaaaaatacctagtcaaaactatgagcttcattctcttaggtgcagt
ggaagcaacaatgcaacaaaaccagaacctcagaaagaacaaagcaaaactaaaaagaaa
aacaagaaaccaaagagtgccaaaaatgaagcctcctccaaggaggcacaggaggaggat
tttgatgcccttattgcagaagccatgacactgaatggtgtgtgcaatttccatagatgt
aaaacaaatgtgttgactttgggtcagaattgtgaattttgtgccaaacgcttttgcctt
gcccatcatatcccagaggtacatggttgtggtgatgcagcaaaatcacgagcaaggatg
ttgatatcgaaggaaggtgttatttatagaggaggtggagttccaaacaaaaaaccagac
ccagcaaaaagggcacatcttcaaagaaagcttgatagcaaacttcatgaatttgaagaa
aagagacaaactaaaaagaaagataaaggaaagtga
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