Lingula anatina: 106160639
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Entry
106160639 CDS
T04921
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
lak
Lingula anatina
Pathway
lak03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106160639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lak03021
]
106160639
Transcription machinery [BR:
lak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
106160639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
106160639
NCBI-ProteinID:
XP_013392748
UniProt:
A0A1S3I3D6
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MAARPTPTPQEFSVRVPKKNTKKFSIMRFNASSNLDFSKAKQENMQAKIGRENNLREYKN
ANDLEDLPKFGAGSEYGREQREEARRKKYGILLKKYNPEDQPWLLKVNKGTDQPRKFKGT
KEGGINDNTSYFVFTQGPDLAFEAYPVEEWYNFNSVINYKYLNSEEAEEEFNRRDKTLNM
FSIMLRKKMKNEDDALDAEEGESIKDKKKTKKKSDLMLTEMEDWVNSDEDDNDEDDDEDE
DGNKEKDEEGIPKKKGKGKKSKKKKDDDDEGDEEGKEDSDDGDYDDKEVDYITDSESSSD
EEFTDKRNEKRYDEKGVVDEEGLRDLNESGESEEETQEQEKDKEDEDAGSSKGAKKEKQD
SSSSSSDSSDEDPEEDGGFASALFMQQKKKKPSSRRGSTGSEPNSRNNSRSNTPIPGEKK
TEDKAVKRKAETESPLAKRVRTSSPITASASSSATSAASTSGTSLVTISSSEGITEDAVK
RYLQRKPMTARDLTQKFKSKKTGLTNEQLVTTLTQILKKLNPDRKKIKDQMYFSIKAD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaggcctactccaacaccacaggagttctctgtgagggtgccaaagaaaaat
accaagaagttcagtattatgcgcttcaatgcttccagtaaccttgatttttcgaaggca
aaacaagaaaacatgcaggctaaaatagggagagaaaacaacttgagggaatacaagaac
gcaaatgatctagaagatcttcctaagtttggtgctggcagtgagtacggtagagagcag
agggaagaagcacgaaggaaaaaatatggcattttgctgaagaaatacaacccagaagat
cagccctggcttttaaaagtaaacaaaggcactgaccagcctagaaagttcaaaggcacc
aaagaaggagggatcaatgacaacacatcatattttgtctttacacaggggccagatcta
gcatttgaggcatacccagtggaagagtggtacaacttcaactctgtgatcaattataaa
tatttaaactcagaggaggcagaggaagaatttaataggcgagacaagactttgaatatg
ttttccataatgttacggaagaaaatgaagaatgaagatgatgcattggatgctgaagaa
ggagaaagcattaaagataagaagaaaacaaagaaaaagagtgacctgatgctaactgaa
atggaagattgggtgaattcagatgaagacgataatgatgaggatgatgatgaggatgaa
gatggaaataaagaaaaagatgaagaaggtatcccaaagaagaaaggaaagggaaagaaa
tccaaaaagaaaaaggatgatgatgatgagggtgatgaagaaggaaaagaggacagtgat
gatggtgactatgatgataaagaagtggattacattacggattctgaatcttcaagtgac
gaggaatttacagacaaaaggaatgaaaaacgatatgatgaaaaaggtgttgtagatgag
gaaggtttaagagacctgaatgaatcaggagagagtgaagaagagacacaggagcaagag
aaagataaagaagatgaggatgctggaagttcaaaaggggccaagaaagagaaacaggac
agtagcagtagcagctctgacagttcagatgaagacccagaggaagatggaggttttgcg
tcagctttatttatgcagcagaaaaagaagaagccatccagtcggagaggatctacaggt
tcagaacctaacagcagaaacaacagtagatccaacacgcccattccaggtgaaaagaag
actgaagataaagctgttaaaagaaaagcagaaacagagagtcccttggctaagagagta
aggacaagcagcccaatcactgcatcggcatccagtagtgccacatcagcagcctccact
agtggtacttctctagtgactataagtagctctgagggaataacagaggatgctgtaaaa
cgatacctccagagaaaaccaatgactgccagagacttgacacaaaaattcaagtctaag
aaaacaggactcactaatgagcaactagtgactactttaacacaaatacttaaaaaactt
aatcctgataggaaaaagattaaagaccaaatgtacttttccatcaaagcagattaa
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