KEGG   Lingula anatina: 106161217
Entry
106161217         CDS       T04921                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
lak  Lingula anatina
Pathway
lak03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106161217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lak03400]
    106161217
Enzymes [BR:lak01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     106161217
DNA repair and recombination proteins [BR:lak03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     106161217
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP LIG3_BRCT DNA_ligase_A_C zf-CCHH BRCT_2 BRCT RNA_ligase mRNA_cap_enzyme DUF4942 CUB_M02D8_5_6th Cytomega_gL
Other DBs
NCBI-GeneID: 106161217
NCBI-ProteinID: XP_013393552
UniProt: A0A1S3I5L9
LinkDB
Position
Unknown
AA seq 1025 aa
MLKLLRLSKTENLLLQRLKPVQCIVGQPCNVHTLQGTLVESAGIYTINTVEKLTKHKKAE
RTLWIGLQLSLVRTFQRGLSDWASDSDTEDEMAENRFCCDYAKRGQASCKKCKQKIEKGV
FRIAKVVTNPFSDEGGDMKQWYHPACIFETFQRARATTKIIEKIEDIEGHEVIKDEEKEI
LEKLIKDLDSKLSPAKKKAMKQAKIDFTNLKTPEKKDATNGNIKHADDDDEKPSTSGYSG
ASFSSKEAEKDNSFRQFRCLCAEIAEEASYNGKTAIVHKFITKGSSGDGFAGSLYLIMKL
LLPGFVKRVYNINNKQLIKLYSQAFGEDQDEMSDHFDQGGDVADTIKEFFEKSTKLPPQK
KSTLSLQEVDAFLDELTLYTREEDQQRALTKIAKKCTANDLKMVVRLVKHDLRINAGAKH
ILDGLDEHAYPAFQASRNLKDVVDRVMANKAENGRKPGMSKKLSIKASLMTPVLPMLAEA
CKSVASAMKKCPNGMYAEIKYDGERVQVHKQGDKFHYYSRSLKPVLPHKVSHFKDFIPKA
FEGGNDLILDSEVLLIDTNTSKPLPFGSLGVHKKAAFKDANVCLFVFDCLHYNGENLMNR
PIKERRKFLRDNMKEIPNRIMFSEMKFINKAEDLKKEMMKVFKEGLEGLVLKDINSIYEP
GKRHWLKVKKDYLNEGAMADTADLVVLGAYYGSGNKGGLMSVFLMGCWDPKRQKWCTVTK
CGNGMDDKKLDQLQKELDMVKIGKNQAKVPDWLDVKKAVVPDFVCADPKKSQVWEITGAE
FSKAEVHTAAGISIRFPRVTKFRDDKGWREATNLDELKHLFKTSKETSDLGESSLMGGKS
PVKNTPKKRKHEDDDDDDDDDDNSNNHYGNPSPTKQIMLTPSKTSPAKRNNDVTPTKKLK
TSDDGNNKPSCKYGAECYQTNPQHLEQFSHPSNRKIKSPIKSKILLDIFKGLKFSLSNSV
EKLKDLKRYIIAYDGDVVPEYDSSQATHVVVGKNEKVENPASNVVSEDWVWGCVKERKLL
PVKDC
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgttaaagctgttacggctttctaagacagaaaacctcttacttcaacgactgaagcca
gttcaatgcattgtggggcaaccctgtaacgtccacacgttgcagggaacgttagtagaa
agtgctggaatttacacaattaacactgttgaaaagttgacaaaacacaagaaagcagag
agaaccctctggatagggcttcagttaagcttagtacgcacctttcaaaggggactatca
gattgggcttctgatagtgatacagaagacgaaatggccgaaaacagattctgctgcgac
tatgcaaaaagagggcaagcaagctgtaagaagtgtaaacagaagatcgaaaaaggagtg
ttcagaatagccaaagttgtaacaaatccattctctgatgaaggaggagatatgaagcaa
tggtatcatccagcatgcatcttcgaaacctttcaacgggcacgtgcaacaactaagatt
attgaaaaaattgaagatatcgaaggacatgaggttataaaggatgaggagaaagagatc
ttggagaaacttataaaagatttggactccaagttatcaccagccaagaagaaggccatg
aaacaagcaaagattgacttcacaaacttgaagactccagagaaaaaagacgctacaaat
ggaaatataaaacatgcagatgatgacgatgaaaagccaagtacatcaggttacagtgga
gcaagttttagcagcaaggaggctgaaaaggacaactctttccgccagtttcgttgcctt
tgtgccgagattgcagaagaggccagctacaatgggaaaactgccattgttcataaattt
attacaaaaggaagcagtggagatggatttgctggcagtctttatctcatcatgaaatta
ttgctgcctggattcgtaaagcgtgtctacaacatcaacaacaaacaactgattaaactt
tacagtcaggcatttggagaagatcaggacgaaatgtcagaccattttgatcagggagga
gatgtggcagataccataaaggagttctttgagaagagcaccaagcttcctcctcagaag
aaaagtactctctcgctacaggaggtggatgcatttctggatgaactgacactctacaca
agagaggaagaccagcaaagggctcttacaaagattgctaaaaaatgtacagccaatgac
ttgaagatggtggtgcgacttgtgaaacacgacctacgcattaatgctggtgcaaaacac
atcctggatggtttagacgaacatgcctacccagcattccaagcttcccgtaacctgaag
gacgtggtagacagggtgatggcgaacaaggcagaaaatggcagaaagcctgggatgtca
aagaaattgagcatcaaggcctctttgatgactcctgtattgcccatgctggcagaagcc
tgcaaatcggtggcttcagcaatgaagaagtgccccaatgggatgtatgctgagattaaa
tacgacggagagagggtacaggtccataagcaaggggacaagtttcactactacagtaga
agcctcaagccagttctacctcataaggtgtcacatttcaaagatttcatcccgaaagca
ttcgaaggaggcaatgatcttattttagacagtgaagtcctgctcattgacactaacacc
agtaaaccacttccttttggttctcttggagtacacaagaaagcagctttcaaagacgcc
aatgtttgcctgtttgtttttgactgtctgcattacaatggagagaaccttatgaacaga
ccaatcaaggaaagaaggaagtttctaagagacaatatgaaggaaattccaaacagaatt
atgttctccgaaatgaagttcattaataaagcagaagatcttaaaaaagaaatgatgaaa
gtttttaaggaaggcttggaagggcttgttctgaaggatatcaatagtatatatgagccc
ggtaaacgccactggctgaaagtgaagaaagattatttgaatgagggagcaatggccgac
actgcagatctggtagtgctgggagcctattacgggtctgggaataaaggaggtctgatg
tctgtgtttttaatgggctgctgggaccctaaacgccagaaatggtgcacagtgaccaag
tgtggcaatggcatggatgacaaaaagcttgaccagttgcagaaagagctggacatggtc
aaaattgggaaaaatcaggccaaagtccctgactggttagatgtgaagaaggctgttgtt
cctgactttgtgtgtgcagatccaaagaaatctcaagtctgggaaataacaggggcagag
ttctctaaagcagaggtccacactgcagcggggatctccattcgatttccacgggtcacc
aagttcagggatgacaagggatggagggaagccaccaatttagatgaactcaagcacctg
tttaaaacatccaaagaaacctctgacctgggtgagtccagcctgatgggtggtaagtcc
cctgtgaagaacacaccgaagaaaaggaaacatgaagacgacgatgatgacgatgatgat
gatgataacagcaataaccattatggcaacccttcaccaacaaaacagatcatgttgaca
cccagcaaaacctcacctgctaaaagaaacaatgatgttacaccaactaaaaagctaaag
acatcagatgatggcaataacaaaccatcttgcaaatatggagctgaatgttaccagaca
aacccacagcatttggagcaattttctcatccttccaataggaagataaaaagtccaatc
aagtcgaagattctactggatatattcaaaggcttaaagttctccttgtccaacagtgtt
gagaaacttaaggacctcaagcgatacatcatagcatatgatggagatgtggttccagag
tatgatagcagtcaagccactcatgttgtagtaggaaagaatgaaaaggttgagaatcca
gccagtaatgttgtgtcagaggactgggtgtggggatgtgtgaaggaaaggaagcttctg
cctgtaaaagactgctga

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