Lingula anatina: 106161714
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Entry
106161714 CDS
T04921
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
lak
Lingula anatina
Pathway
lak03022
Basal transcription factors
lak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106161714
09124 Replication and repair
03420 Nucleotide excision repair
106161714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lak03021
]
106161714
03400 DNA repair and recombination proteins [BR:
lak03400
]
106161714
Transcription machinery [BR:
lak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106161714
DNA repair and recombination proteins [BR:
lak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106161714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
SinI
Motif
Other DBs
NCBI-GeneID:
106161714
NCBI-ProteinID:
XP_013394189
UniProt:
A0A1S3I9V8
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MATLSTRKIVSKDLHDYLGSLSPGILNRLYSYPATCLAVFRELPCLARHYVMRILFVEQP
VPQAVVSSWVENKHQEEHQQACQVLSELRVWQNHQLPGGLTGWMLNETYRWNLKTALLGG
GTSWTSAILEPDKYAKDIPFLDSYAMERWECVLHFMVASKEAVSGVSRDVVDILLHGDLM
RVDESDSQPMITASGFQFLLMDTASQVWFFMLQYLDTVESRGMDIVEALSFLFQLSFSTL
GKDYSTEGMSESQLKFLQHLREFGLVFQRKRKAQRFYPTRLAVNLATGVSKTSTATDMHR
PGYIVVETNYRVYAYTESSLQYALLALFCEMLYRFPNFVVAQVTRDSVRQALMSGISAEQ
IINFLRSHAHPESLKQNPVIPSTITDQIRLWELERDRFKFTDGVLYNQFLSQTDFELLRD
YARDIDVLVWENPQKRTMVVTRGGHDDVKKFWKRQRSSNS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctgagcacgagaaagatagttagtaaggatttgcatgattatttgggaagt
ttgagcccaggcattctcaacagactctacagctacccagcaacatgcttagcagtgttc
agggagctcccctgtctagccagacactatgtaatgaggattttgtttgtggagcaacca
gttccccaagctgttgtgtcttcatgggtagagaataaacaccaggaagaacatcagcaa
gcctgccaggtgctgtcagagttaagggtgtggcagaaccaccagctccctgggggacta
acaggttggatgctcaatgaaacatacagatggaatctgaaaacagcattattaggaggt
ggcacctcttggaccagtgcaatacttgaaccagataaatatgccaaagacatcccattc
cttgacagttatgcaatggagaggtgggagtgtgtcctccacttcatggtggcctccaag
gaagcagtgtctggagtcagcagagatgtggtggatattctgttacatggtgacctcatg
agagttgatgagagtgactcccagccaatgatcacagcctcagggttccagtttcttctg
atggacacagcctcccaagtctggttcttcatgctacagtatctggacactgtggagtct
agaggcatggacattgttgaggccctgtctttcctcttccagctcagtttctccacacta
ggaaaggattactccacagaaggaatgagtgaatcccagcttaaatttctgcagcatctc
agagaatttggtctggtgtttcagagaaagagaaaggctcagaggttttatcccaccaga
ctggctgtaaacctggccacaggagtgtccaagaccagcactgctacagatatgcacaga
cctggctatattgtggtagagacgaattacagagtgtatgcttatacagagtcttcttta
caatatgcattgctggcattgttctgtgaaatgctgtacagatttcccaattttgtagtt
gctcaggtaacccgggatagtgtgcggcaggcactgatgagtgggatatcagcagaacag
ataatcaactttctccgtagccacgcccacccagagtcactgaaacagaacccagtgata
ccttccaccatcacagatcagatccgcctctgggaactggagagggacaggttcaagttc
acagatggggtcctctataatcaattcctatcacagactgactttgagttgttacgggac
tatgctagagatattgatgtgttagtgtgggaaaacccacaaaaaagaacaatggttgtg
acaagaggtggccatgatgatgttaaaaaattctggaaaagacagaggtccagtaatagc
tag
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integrated database retrieval system
