Lingula anatina: 106162283
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Entry
106162283 CDS
T04921
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
lak
Lingula anatina
Pathway
lak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106162283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lak03041
]
106162283
Enzymes [BR:
lak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106162283
Spliceosome [BR:
lak03041
]
Complex C
Other components
Step II factors
106162283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
AAA_7
PhoH
TsaE
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106162283
NCBI-ProteinID:
XP_013394959
UniProt:
A0A1S3IC07
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MNELEKLEHLSLVSKVCTELDNHLGLNDKDLAEFIISLAEKNNTYESFKKTLDENGAEFP
ESFTANLLRLIQHMKPKKKEVEGDGEVEDKVLKKKLFPGLAIPDDPSVRNMLASDHKPVP
TSDQKPAAPASDQQVADDMLGELEAMFSSEKKENKPDISKPKHRSRSRDRDRKKKHRSRS
RSRDRKRDRKRSRSRSRDRYRDRKKRSRSRSRSRDRKRRERSRSRSRDRYRDESKKRDRH
REKEVELPLEPIPGMICNGKVTSIMQFGAFVQLEGLRKRWEGLVHISQLRREGRVINVSD
VVSKGQRVKVKVLSFTGQKTSLSMKDVDQDTGEDLNPSKTRMLGGEVDADDDTTARNPDR
PSTLPLVDLPNIDEIKEVRRGPRMSSPERWELKQMMAANVIDKSELPDFDEETGLLPQIE
DDSDEDLEVELVEEEPAFLKGYGRTSNLDLSPVKIMKNPDGSLAQSAMMQSALQKERREI
KQQQREEEMTKANPDEVSRSFADPMAGIEGRQLTANMRGPGGSTTDLPEWKKHISGGVKA
SYGKKEKKSILEQRQGLPIYKLKNELIKAVTDNQMLIVIGETGSGKTTQITQYLAEAGYT
TMGKIGCTQPRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTSPETKIKYMTDGMMLR
ECLIDPDLSQYSIIMLDEAHERTIHTDVLFGLLKRAVLKRKELKLIVTSATLDAVKFSSY
FFEAPIFTIPGRSFPVETLYTKEAETDYLDASMITVMQIHLTEPPGDILLFLTGQEEIDS
ACEILYERMKALGPEVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTI
DGIYYVVDPGFVKQKVYNSKTGMDQLIVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAY
RDEMLPTQVPEIQRTNLASTVLSLKAMGINDLLAFDFMDPPPMQTLISAMEQLHALSALD
DEGLLTRLGRRMAEFPMEPMLSKMLIMSVHLGCSDEILTIVSMLYVQNVFYRPKVGRTLA
A
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagttagagaaactagaacatctttctttggtatctaaagtatgtactgagttg
gacaatcatttaggtctaaatgataaggatttggctgagtttatcatttccttggcagag
aaaaacaacacctatgaaagtttcaagaaaacattggatgaaaatggggcagagtttccc
gagtcattcacagcaaacctgctgcgtcttatacaacacatgaagcccaagaaaaaagaa
gttgaaggtgatggagaagtagaagacaaagtgctgaagaagaaactgtttccaggactt
gcaataccagatgatcccagcgtaaggaacatgctggccagtgaccacaagccagtcccg
accagtgaccagaagccagcagctccagcaagtgaccagcaggtggctgatgatatgctg
ggagagttagaggctatgttctccagtgagaagaaggaaaacaagccagatatctccaag
ccaaaacacagatccaggagtagagacagagatcgtaaaaagaaacacaggtctcgcagc
cgttcaagagacagaaaaagagatcgtaaaagatcaagaagtcgctccagagacagatac
agggacagaaagaaaagatcgcgctctagatccagaagtcgtgacaggaaaagacgtgag
cgctccagatctcgtagtcgtgacaggtacagagatgagtcgaagaagagagatcgacac
agagagaaagaagtagaactgcctctggaacccattcctgggatgatctgcaatggcaag
gtgacttccattatgcagtttggagcatttgtccagttggaagggctgagaaagagatgg
gaaggtctggttcatatatcacagctgcgtagagaaggcagggtgatcaatgtgtctgat
gtggtcagcaaaggtcaaagggtcaaggtcaaggttctctcatttactggacagaagacc
agtttgtccatgaaggatgtggatcaggacacgggagaagacctgaaccccagcaagacc
aggatgttgggtggtgaagtggacgctgatgatgacactacagccagaaatcctgaccgt
ccatccaccctgcctctggttgacctgccaaacattgatgagatcaaagaggtacgacgc
gggccacggatgtcctctcctgaaaggtgggagttgaaacagatgatggcggccaatgtt
attgataaatctgagctgcctgactttgatgaggagacaggactgttaccacagatagaa
gatgattctgatgaggacctagaggtggagctggtggaagaagagcctgccttcctgaag
gggtatggacgtaccagtaaccttgaccttagtcctgtgaagattatgaagaaccctgac
ggctctcttgcacagtccgccatgatgcagtctgctcttcagaaagagaggagggaaatc
aagcagcagcagagggaggaagagatgacaaaggccaatcctgatgaagttagcaggagc
tttgctgaccctatggctggaattgaggggcgccagctgacggcaaacatgcgtggtcca
ggtggcagcaccactgacctcccagagtggaagaaacacatcagcggcggtgtgaaggca
tcatacgggaagaaagagaagaagagtattctagagcagagacaggggctgcctatctat
aaactgaagaatgaactgatcaaggctgtgacagacaaccagatgttaattgtgattgga
gagacggggtcggggaagacaacgcagatcacccagtacctggcagaggctggttacacc
accatggggaagattggttgtacacagcccaggagagtagctgctatgtctgtagctaag
agagtgtcagaggaatttggttgtagactaggacaagaggttggttataccatccgtttt
gaagactgtaccagtcctgagaccaagatcaagtacatgacagacggtatgatgctaaga
gagtgtctgatagaccctgatctctcccagtactctattatcatgttggacgaggcccac
gagagaaccatccacacggatgtgctgtttgggctgctgaagagggctgtactgaagaga
aaagagctgaagttgattgtcacctcagccactctagatgctgtcaagttttcttcttat
ttctttgaagctcctatcttcaccatccctggtcgttccttccctgtggagacgctgtac
actaaggaggcagagacggattacctggatgcctccatgatcaccgtgatgcagatccac
ctgacagagccgcccggagacattctgctgttcctgacgggacaagaagagattgactcc
gcgtgtgagatcctgtatgagaggatgaaggccctgggacctgaggtcccagaactgatt
atactgcctgtgtactccgcactgcccagtgagatgcagaccaggatatttgagcctgct
ccaccaggatctagaaaggttgtcatagccaccaacatagcagagacgtccctgaccata
gatggcatctactacgtggtggatcctggctttgtgaaacagaaagtctacaactccaag
acaggcatggaccagctgatagtgacccctatatctcaggcacaggccaagcagcgtgcg
gggagagcagggcgaacggggcctgggaagtgttaccgtctgtatacagagagggcgtac
agggacgagatgttgcccacacaggtgccagagatacagagaactaacttggccagtacg
gtgctgtcactgaaggccatggggatcaatgacttactggcctttgacttcatggacccg
ccccccatgcagacgttgatctccgccatggagcagctccatgctctctccgcgctggat
gatgagggtctgctcaccagactggggcgacggatggcagagtttccaatggaacccatg
ttgtctaagatgttaattatgtctgttcacctgggatgtagtgatgagatccttaccata
gtctccatgttatatgtacagaatgtattctatagacccaaggtaggcagaactctggca
gcttaa
DBGET
integrated database retrieval system
