Lingula anatina: 106163829
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Entry
106163829 CDS
T04921
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lak
Lingula anatina
Pathway
lak03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106163829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lak03021
]
106163829
03036 Chromosome and associated proteins [BR:
lak03036
]
106163829
Transcription machinery [BR:
lak03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106163829
Chromosome and associated proteins [BR:
lak03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106163829
PBAF complex
106163829
GBAF(ncBAF) complex
106163829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
106163829
NCBI-ProteinID:
XP_023930309
UniProt:
A0A2R2MJD6
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MAVVRKKDGGANQKFFESSETIAQFDSVRTWLHKNCKKYTQAEPPTNKSLASLVVQLIQF
QEDAFGKQVKAPPLTKLPMKYFLDFKSGGALCHILAAVYKFKSDQGWRRFDFQSPSRMDR
NVEMFMQIEKSLVQNKCLLIPSVYIKSSMEKSLSSKLKDIITRHKGTVVEDSDEATHIVY
PPTEKEPEDYVRPVMKRDRCTMVHWWYYPDSYDTWVTDVHIDQEPGSPALPETAWEVNGN
WILDLDEFNEWMNEEDYLIDDENGSESGSRKGRKQRVKLTVEEIAPSPDPDRKEKKKGKR
KRSPSPSSDKKKKRGAAGRSTPSSKKKATSYKDEDSEDLTKDMEDPTPEPNIQEVHIPKN
ASSSRSGKDSELQPIKGGTLMDVEEDADGVEENKENTEDAGKSMDHEENVTEQTHHIIIP
SYSAWFDYNSIHAIERRALPEFFNSKNKSKTPEVYMAYRNFMIDTYRLNSQEYLTSTACR
RNLAGDVCAIMRVHAFLEQWGLINYQVDAENRPTGMGPPPTSHFHVLCDTPSGLGPLNPP
RTSQPSAAKQVMDFDKSKEREGDEKREGQTFGLRTDTYAQKALKEKGAATRTRDWTDQET
LLLLEALEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDGPSPLGESGPLTYQ
PIPFSQSGNPIMTTVAFLASVVDPRVASAASKSALEEFSKMRDEVPSVLIDQHVKNVEQA
VAEGKQVNADYGLDKSGIAGTSMEKEEIPEGEKKEGKEGEGEKKEEENKEGEKKEEEVKE
EKSEEKEEDKVKEEAMETDQEDQKPEEKEGKEEKEKDGDKDDQTDDKKEEKKEEEMQGDS
TVKTEGDGASTEPSKEVAVKENITESNIQAAAAAALASAAVKAKHLAAVEERKIKSLVAL
LVETQMKKLEIKLRHFEELESIMDREREALEYQRQQLLQERQQFHMEQLKAAEYRARQMA
AQQLQIEKMQQQHQQFQQQQQQSLQQHSAPSSSPAPHHLGAGDHVSHHPPPPEAPSASAV
PAPPEPEEQTPPVAPPMPSAPQDTAPPAPVEPTAQEPPAAQGLQQEEAMETDSAHPLPSE
TMPQTLPTQS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtgagaaagaaagacggtggtgcaaaccaaaagtttttcgagtcgtctgag
actattgcacagtttgattcagttcggacatggcttcacaaaaactgcaagaaatacaca
caagcagaaccccctaccaacaaaagcttggccagtttagtggtacagctgatacagttt
caggaagatgccttcggaaaacaggtcaaggcccctccccttaccaagctaccaatgaaa
tatttcctggacttcaagtctggaggtgctctatgtcacatacttgctgcagtgtacaag
ttcaaaagtgaccaaggctggagaagattcgacttccagtccccctcgcgcatggatcgt
aatgtggagatgttcatgcagatagagaagtccctagtgcagaacaagtgtcttctgatc
cccagtgtgtatatcaagtcttctatggagaaatctctcagtagtaagctgaaggatatc
attacaagacacaaggggacggtggtggaggattccgatgaggccacacacattgtgtat
cctcccacagagaaagagcctgaggactatgtcaggcctgtgatgaagagagatagatgt
accatggtacactggtggtactatccagacagttatgatacatgggtgactgatgtccac
attgatcaggagcctggatctcctgctttaccagaaactgcctgggaggttaatggaaac
tggattttagacctggatgagttcaatgaatggatgaatgaagaagactatctgattgat
gatgaaaatggatctgaaagtggcagcagaaagggcaggaaacaacgtgtgaagcttact
gtagaggagattgctccaagtccggacccagacagaaaagagaaaaagaaagggaaaaga
aagcgctcacctagtccatcatctgacaagaagaaaaagaggggagctgcagggaggtcc
actccatccagtaagaagaaggccacatcgtacaaggatgaagattcggaagatttgacc
aaagacatggaggacccaacccctgaacctaacattcaggaagttcacattcctaaaaat
gcctccagttcacggagtggcaaggacagtgagctgcagccaatcaaaggcggaactctt
atggatgtggaggaagatgctgatggggtggaagaaaacaaagagaacacagaggatgca
ggaaagtccatggaccatgaagagaatgtgacagagcaaacacaccatataatcatcccc
agttactctgcctggtttgactataacagtatacatgccatagaaaggagagctctacca
gagttctttaattccaaaaataagtctaaaacaccagaagtgtatatggcctacagaaat
ttcatgatagacacttaccgtctgaactctcaggagtatttaacaagtacagcctgcagg
agaaacctggctggggatgtgtgtgctattatgagggtccatgccttcctggaacagtgg
ggtttgattaactaccaggtggatgctgagaacagacccacagggatggggccacccccc
acctcccacttccatgtgttgtgtgacaccccctctggattggggccactcaacccaccc
aggaccagccagccatccgctgccaaacaagtgatggactttgacaagagcaaagaaaga
gaaggtgatgagaagagagaagggcagacatttggactgaggacagacacctatgcccag
aaagctctcaaggagaaaggcgcagctaccaggacccgggactggacagatcaggagacc
ctgctgctactagaggctctcgagatgtataaagacgactggaacaaggtttgcgaacat
gtaggatcgcgcacccaggatgagtgcattcttcacttcctgcgcctgccaatagaggat
ccttaccttgaagatgacggaccctcacctcttggtgagtcaggccccctgacataccag
cccattccattctcccagagtggaaaccccatcatgaccacggtggccttcctagcttca
gtagtggaccccagggtggccagcgccgcctccaagtctgctctagaggagttctccaag
atgcgtgatgaggtgccgtcagtgctgatagaccaacacgtcaagaacgtggagcaggca
gtggcggagggcaaacaggtcaatgcagactatggattggataagagtgggattgctggc
accagtatggaaaaggaagaaattccagaaggtgagaaaaaagaggggaaagaaggagag
ggagaaaagaaggaagaggaaaataaagagggagagaaaaaggaggaagaagtgaaagaa
gaaaaatctgaagagaaggaagaagacaaagtgaaggaagaagccatggaaacagaccaa
gaagatcagaagccggaggaaaaggaaggaaaggaagagaaagaaaaagatggagacaaa
gatgatcagacagatgataaaaaggaggaaaagaaggaagaggagatgcaaggagattct
acagtaaagacagaaggagacggtgcatccacagaaccttccaaagaagtagcagtcaaa
gaaaacatcacagagtccaatatacaggcagcagctgcagcagcactggcctcagcagca
gtgaaggcaaagcatctggcagcagtggaggaacgcaagatcaaatctctggtagcgcta
ttagtggagacgcagatgaaaaagctggagattaaactgagacatttcgaggaactcgag
tccatcatggacagggaaagagaagctctggaataccaacggcaacaacttttgcaagag
cgccagcagttccacatggagcagttgaaggcagccgagtatcgtgcccgccagatggca
gcacagcagttacagatcgagaaaatgcagcagcagcatcaacagttccagcagcaacag
cagcaaagtttgcagcaacattctgcaccatcctcgtccccggcaccacatcatttaggt
gctggtgatcatgtatcacatcaccctcctccacctgaggcaccctcagcctcggcagta
ccggcgccacctgaaccagaggagcagacaccaccagtggcaccacccatgccatcagca
ccacaagatacagcaccaccagcaccagtggagccaacagcacaagaacccccagcagca
caaggtttacaacaggaagaagctatggagacagactctgcccatccactgccctctgaa
accatgccacagactctgcctacccagtcatag
DBGET
integrated database retrieval system
