Lingula anatina: 106163956
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Entry
106163956 CDS
T04921
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
lak
Lingula anatina
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lak03021
]
106163956
03036 Chromosome and associated proteins [BR:
lak03036
]
106163956
Transcription machinery [BR:
lak03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106163956
Chromosome and associated proteins [BR:
lak03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
106163956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
HHH_9
SH2
Tex_YqgF
S1
HHH_3
SPT6_acidic
Spt6_S1
Tex_N
Motif
Other DBs
NCBI-GeneID:
106163956
NCBI-ProteinID:
XP_013397139
UniProt:
A0A1S3II18
LinkDB
All DBs
Position
Unknown
AA seq
1793 aa
AA seq
DB search
MSDFMDDEASVSSGSEDASDDEQKKPDKKKKSKKQAINSDSEDSDEEEEEEDDEAEDDDD
KIREEMKDLINDEEEEEEGPASEDEKKEDSDIDDQLEEDDYDLIEENLGIKVQRKRKHTR
IRVLSDDEDSDKDDEPEAKKGKETIANQIFEGDDDDLPDTQMEETSQQEPEEKFGELEES
EEESDVDDFIVDDEGQPISKTKKKKHIIHTDSALQEAQDIFGVDFDFADFDQYGSEYEED
ELEEEYEEEMEGEEGTVKPKKKTSKKRAKKSIFEVYEPSELEKAHLTDVDNEIRTTDMPE
RFQLRGIPVLPTEEGELEEEAEWIYKHAFCTQPLSSQDQDGGEGQSYYNRKGPSTVVKIK
EALHFMRNDQLEVPFIAFYRKEYVNPELNIKDLWKVWQWDEKWTQLRSRKKNLVRLFEKM
QQYQFELIDPEKPLPSHFRSLTSDDIERAKNIQSMEEYKDVYQHFLLYYGADIPKMKNAE
KKKKKTKPVKEKEPEKDVEVEGDGEKEEGETEEGEEEKKAKEPEEEEEEEEDNTVHLKQA
TRKTGYTLCCENGLAEVACKFGLTPEQFGENLRDNYQRHEVEQYPLKPLDVAKDFIVGVF
NTEEDVLKGARHVVAMQIAHDPLVREVVRETFFERATIDCRPTKKGIKMIDEAHPCYTCK
YLRHKPTSDLQNEQFLKMVMAEEDQLLTMDIGLHDKDAYFDDIKQLFYRDEFSSLVQEWN
NQRSLALERALKVILFPQMAKELKTKLIQEAKDGVVQSCARKLYNWLKVAPYQTDQPDLD
DDDDDYSKGLRVLGIGFAPDRETAAFGALIDGDGEVTEYIRLPHLLKMKGGFREMDSKQK
REDLEKLKDFISTKKPHVIAVAADSLPAKNIIEDLQELVTELEQEQQMAPINVELVDNEL
ALIYECCNKAESDFRDYPPLLRQAISVARRLQDPLIEFAQMFNTDEDILCLKYHPLQDQV
SKDDLLNALNLEFVNRVNEVGVDVNRAVAHSHTSHLVQFVCGLGPRKGAYLLKILKQNNA
RLENRTQLVTLCHMGPKVFINCAGFIKIDTNSLGDSTDAYVEVLDGSRVHPETYDWARKM
AVDALEYDDTAEDANPAGALEEILESPERLKDLDLDAFAEELERQNYGNKHITLYDIRAE
LNHRYKDLRTPYRPPSEEERFNMLTKETPQTFYIGKLIMCRVNGFAFRKPHGDQLDQANP
VRNDETGLWQCPFCMTNDFPELSEVWSHFDAGSCPGTVVGVKVRLDNGCRGFLPNRNISD
KHVTNPEERVKNGMILHSRITKINIERFEVEVTCRTSDLVDKEGTWRPAKDRYYDIELEE
ADMKKEDDKKKLQARQTYIKRVIVHPSFHNIDFRTCEKLMANMDQGEVIIRPSSKGADHL
TVTWKVTEGVYSHIDVKEDGKENAFSLGQSLLIGNDEFEDLDEIIARHIQPMAAFARDII
NFKYYKEVEGGKRENIEKILIEEKKKGPSKIPYYFSVAKELPGKFMLSYLPRTKPKHEFV
TVTPDGMRYRGQVFHSLNSLIKWFKEHFRDPPPGTPASTRTPLGLAATPSINLHGVDAAT
LRQAAAGLPSNIYSTLAQVAGATPRATPQIGSTPQSYQTARNFAGGYSGGYNLQPTATPL
LTPMMTPSYHTSQGLGTTPLYQPTPRTSNWPGNTPRQQASATTPRVHPATTPRQQPGLTP
RQQPGITPRQQPGLTPRQSGMTPRHSHSHTSTTPRQSGATPTRTHGSSSGSTPSGRTPTH
SSRSSSKAATVTDWAKAAEMWAKKRANQGYKTPQSDVGSTTPAGDSTPLIDER
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttcatggacgatgaagccagtgttagcagtggaagtgaagatgccagtgac
gatgaacagaagaagcctgacaaaaagaagaaaagcaaaaaacaagccataaattctgat
agcgaagacagcgatgaagaagaagaggaggaagatgatgaggcagaggatgatgatgat
aaaatacgagaagaaatgaaggatcttatcaatgatgaggaagaggaggaggaaggacct
gccagtgaggatgagaaaaaggaggattcagatattgatgaccagttggaggaggatgat
tatgacttgattgaggaaaacttgggaattaaagtgcaaagaaaacgcaagcacacccga
atcagagtgctgtcagatgatgaagacagcgacaaagatgatgaaccagaggccaagaag
ggcaaagagacaatagctaaccagatttttgagggggatgatgatgacttacctgatact
cagatggaggaaacctcacaacaggaaccagaagagaagtttggggagttagaagaatct
gaggaagagtcagatgttgatgacttcattgttgacgatgaagggcagcccataagtaaa
actaaaaagaaaaagcatattatccacactgacagtgctctccaagaggcccaggatatc
tttggtgtagattttgactttgcagattttgatcaatatggtagtgaatatgaagaagat
gaacttgaggaagagtacgaagaagagatggaaggggaagaaggtactgtcaaaccgaag
aaaaagacctccaagaaaagggccaaaaagagtatatttgaggtatacgagcccagtgag
ctggagaaagcacatttaacagatgtggacaatgaaatcaggaccacagatatgcctgag
agatttcaattacgtggcatccctgtcctccccacagaagagggtgagctagaagaggaa
gctgagtggatctacaaacatgctttctgcacacaacctctgtcctcacaggatcaggat
ggtggggaaggccagtcatactacaaccgtaaaggacccagcactgtggtcaaaattaaa
gaagctctacacttcatgaggaatgaccagcttgaggttcccttcattgccttctacaga
aaagaatatgtcaacccagaacttaacataaaagacttgtggaaagtatggcagtgggat
gaaaagtggactcagctgaggtcaagaaagaagaatttagtcagattgtttgagaaaatg
cagcagtatcagtttgagctgattgacccagagaagcctttgccttcacacttcaggtca
ctcacatcagatgatattgaaagggccaaaaacattcaaagtatggaggaatacaaggat
gtttatcaacatttcctgctgtactatggagcagacattccaaagatgaaaaatgcagag
aaaaagaaaaagaaaactaaaccagtaaaagagaaggaaccagagaaggatgttgaagtg
gagggggatggagagaaggaggagggggagacggaagagggggaggaggaaaagaaagct
aaagaaccagaagaagaggaggaagaagaagaagacaatacagttcacttaaaacaggcc
acaagaaagacggggtatacattatgctgtgaaaatgggctagctgaggttgcttgcaaa
tttggattaaccccagagcagtttggtgagaacttgcgtgataactaccagagacatgaa
gtggagcagtaccccttgaaaccactggatgtggccaaagattttattgtaggtgtgttt
aatacagaagaagatgtgttgaagggagccagacatgtggtggccatgcagatagctcat
gaccccctggtcagagaggtggtcagggagactttctttgagagagccaccattgattgc
agacccactaagaaaggcatcaagatgattgatgaagcccatccatgttacacttgcaag
tacctgagacacaaaccaacatctgatcttcagaatgagcagtttctcaagatggtcatg
gctgaagaggatcagttactgactatggacataggactccatgacaaagatgcctacttt
gatgatatcaaacagctgttttatagggatgagttcagttcactagttcaggagtggaac
aaccagcgcagcttggcactggagagggcactgaaggtgattctgttccctcagatggcc
aaggaactcaagactaagctcatacaagaagcaaaggatggtgttgttcagagttgtgcc
cgcaaactgtacaactggctgaaggtggccccttaccagacagaccagcccgacctggat
gacgatgatgatgattactccaaaggactgcgtgtactggggataggctttgctccagac
agggagacagcagcatttggagccctaattgatggggacggggaagtcactgagtacatc
aggctgccacatttgcttaagatgaaaggagggtttagagaaatggacagcaaacagaag
agagaagatcttgaaaagttaaaggattttatttccaccaagaagcctcatgttatagct
gtggctgctgattcattacctgccaagaatatcatagaagacttacaggagctggtgaca
gagctggaacaggagcagcagatggcacccatcaatgtagaactggtggataatgagctg
gctctcatttatgagtgctgcaataaagctgagtctgatttccgggattatcctccacta
ctgaggcaggccatctctgtggctaggagactgcaggaccctctcatagaatttgcacag
atgtttaatacagatgaggacatcttgtgtctgaaatatcatcctttgcaggaccaagtg
agcaaagatgatctgctgaatgccctgaacctggagtttgtgaacagagtgaatgaagtg
ggggtggatgtgaacagagcagtggcacactcccacacatcacatctagtacagtttgtt
tgtggcctggggccaagaaagggggcatatctactgaagattttgaagcagaacaatgct
cgtttggagaacagaactcagttggtcaccctgtgccacatggggcccaaagtgttcatt
aactgtgctgggtttatcaaaatagacactaactctcttggagacagcactgatgcctat
gtggaggtccttgatggctctcgtgtccacccagagacctatgactgggcaaggaagatg
gctgttgatgccctggagtatgatgacacagcagaggatgctaaccctgcaggtgccctg
gaggagatcctggagagccctgagaggctcaaagacctggatctggatgcctttgctgag
gaactggagagacagaactatggtaacaagcacatcaccctgtatgacatcagagctgag
ctgaatcacagatacaaagacctgagaacaccttacagaccaccttcagaggaggaacgg
tttaatatgctcactaaagaaaccccacagactttctacattggcaagctgataatgtgc
agagttaatgggtttgcgttcagaaagcctcacggggatcagttagaccaggctaaccca
gtaaggaatgatgagactggactgtggcagtgcccattctgtatgacaaatgattttcca
gaattgagtgaggtttggagtcactttgatgcgggcagctgtccaggcactgtggttggg
gtcaaggtcaggctggacaatggctgtagagggttcctgcccaacagaaacattagtgat
aaacatgttacaaatcctgaggaaagagtcaagaatgggatgatcctacacagccgtatc
actaagattaacattgagaggtttgaggtggaggtcacctgtaggacatcagacttagtg
gacaaagagggaacatggaggcctgccaaggaccgttattatgatattgagttggaagaa
gcagatatgaagaaagaagatgataagaaaaagcttcaggccaggcaaacttacatcaaa
agagtcatagttcatccatcgtttcacaacattgactttagaacatgtgagaaactgatg
gctaacatggaccaaggagaggtcatcataaggccaagtagtaagggtgcagaccacttg
actgtgacgtggaaagttacagaaggtgtttactctcacatagatgtcaaagaagatggc
aaagagaacgctttcagtctgggacagtccttactcataggcaatgatgaatttgaagat
ctggatgaaattatagctcgacatattcaacccatggcagcttttgctagagacatcata
aacttcaagtattacaaagaggttgaaggtggaaagagggaaaatattgaaaagattctt
attgaggagaagaaaaagggaccttcaaagatcccatactacttcagtgtggccaaggaa
ttacctgggaagtttatgctatcctacctgcctaggaccaaacctaagcatgagtttgtc
actgtgacaccagatggcatgaggtacaggggccaggtgttccattcactcaactctctt
attaaatggttcaaagaacacttcagggatccaccaccaggcactccagcatctacgaga
actccacttggtctggcagctacaccaagtattaacctgcatggtgtggatgcagccacc
ctgaggcaggcggccgcaggactgcccagtaacatatacagcaccctggcccaggtagca
ggtgccacccccagggccacaccccagataggatccaccccacagtcctaccagactgcc
aggaactttgcagggggatatagtggaggctataacctgcaaccaacagctactccactg
ttgacacccatgatgactccatcataccacacaagtcagggtctggggaccacaccccta
taccagccaacccctaggacatccaactggcctgggaataccccacggcaacaggccagt
gccaccactcccagggtccaccctgctaccacacccaggcagcagccagggttaaccccc
aggcaacaacctggcatcacccctcgccagcaaccagggttaacacccagacaatctggc
atgacacccaggcactcacactcacatacaagtaccacacccaggcaatctggtgccacg
cccactagaacccatgggtcatcatctgggtccacccccagtggtaggacacccactcac
tccagtcgctctagcagcaaggctgccactgtgactgactgggccaaggcagcagagatg
tgggctaagaaacgtgccaaccagggctacaagacaccccagtctgatgtaggtagtacc
acacctgctggggactctacaccacttattgatgaaaggtga
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integrated database retrieval system
