KEGG   Lingula anatina: 106164217
Entry
106164217         CDS       T04921                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
lak  Lingula anatina
Pathway
lak03020  RNA polymerase
lak03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106164217
  09124 Replication and repair
   03420 Nucleotide excision repair
    106164217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lak03021]
    106164217
   03400 DNA repair and recombination proteins [BR:lak03400]
    106164217
Transcription machinery [BR:lak03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106164217
DNA repair and recombination proteins [BR:lak03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106164217
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Ogr_Delta Zn_ribbon_recom CpXC Lar_restr_allev Zn_ribbon_NrdR SR1P DUF3716 Zn_Ribbon_1 DZR
Other DBs
NCBI-GeneID: 106164217
NCBI-ProteinID: XP_013397501
UniProt: A0A1S3IHZ2
LinkDB
Position
Unknown
AA seq 125 aa
MYEHHDDGPGFVGIKFCQECNNMLYPKEDKENKILAYACRNCDYQQEADNPCIYVNKITH
EVDELTQIIADVIADPTLPRTDDHPCPKCGHKEAVFFQSQTTKTEQGMRLYYVCTNNNCT
HRWTE
NT seq 378 nt   +upstreamnt  +downstreamnt
atgtacgaacatcatgatgatggcccgggttttgtcgggataaaattctgccaagaatgc
aataacatgttgtaccccaaagaagacaaagagaataaaatcctagcatatgcatgtcga
aattgcgactatcagcaagaggcagacaatccatgtatatatgtgaacaaaattacacat
gaagtagatgaacttactcaaatcatagctgatgttatagcagatccaacacttcctaga
acagatgaccacccttgtcctaaatgtggtcataaagaagcggttttcttccagtcacag
acaactaaaacagagcaagggatgcggctatactatgtttgcacaaataacaactgcact
cataggtggacagagtaa

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